Andreas Tille pushed to branch master at Debian Med / mcl
Commits: 0f4a6d53 by Andreas Tille at 2024-12-23T11:35:28+01:00 Save backup of changed docs to restore it in clean target Closes: #1046152 - - - - - e75a3bc3 by Andreas Tille at 2024-12-23T11:35:39+01:00 Standards-Version: 4.7.0 (routine-update) - - - - - 92f2ae6f by Andreas Tille at 2024-12-23T13:44:54+01:00 Upstream just does not support OCaml and the patch is way to outdated for recent OCaml versions - - - - - 4c340e99 by Andreas Tille at 2024-12-23T16:14:07+01:00 Really fix clean target - - - - - 399b97d4 by Andreas Tille at 2024-12-23T16:15:43+01:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - debian/patches/series - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,8 +1,11 @@ -mcl (1:22-282+ds-3) UNRELEASED; urgency=medium +mcl (1:22-282+ds-3) unstable; urgency=medium * Move external code in a separate subdirectory + * Save backup of changed docs to restore it in clean target + Closes: #1046152 + * Standards-Version: 4.7.0 (routine-update) - -- Andreas Tille <[email protected]> Wed, 16 Nov 2022 15:11:45 +0100 + -- Andreas Tille <[email protected]> Mon, 23 Dec 2024 16:14:18 +0100 mcl (1:22-282+ds-2) unstable; urgency=medium ===================================== debian/control ===================================== @@ -9,14 +9,14 @@ Build-Depends: debhelper-compat (= 13), zoem, tidy, aephea, - ocaml, - ocamlbuild, - ocaml-findlib, - oasis, - bsdextrautils | bsdmainutils (<< 12.1.1~), +# ocaml, +# ocamlbuild, +# ocaml-findlib, +# oasis, + bsdextrautils, dh-exec, libtingea-dev -Standards-Version: 4.6.1 +Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/mcl Vcs-Git: https://salsa.debian.org/med-team/mcl.git Homepage: https://micans.org/mcl/ @@ -27,8 +27,7 @@ Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} Suggests: mcl-doc -Enhances: blast2, - ncbi-tools-bin, +Enhances: ncbi-tools-bin, bioperl-run Description: Markov Cluster algorithm The MCL package is an implementation of the MCL algorithm, and offers @@ -41,29 +40,13 @@ Description: Markov Cluster algorithm Package: mcl-doc Architecture: all +Multi-Arch: foreign Section: doc Depends: ${misc:Depends} Suggests: mcl -Multi-Arch: foreign Description: documentation for mcl The MCL package is an implementation of the Markov Cluster algorithm, for manipulating sparse matricess and conducting cluster experiments. . This is documentation for mcl: the MCL FAQ, some examples as well as manpages in HTML and PostScript format. - -Package: libmcl-ocaml-dev -Architecture: any -Section: ocaml -Depends: ocaml-findlib, - mcl, - ${ocaml:Depends}, - ${shlibs:Depends}, - ${misc:Depends} -Provides: ${ocaml:Provides} -Description: library providing bindings between mcl and OCaml - The MCL package is an implementation of the MCL algorithm, and offers - utilities for manipulating sparse matrices (the essential data - structure in the MCL algorithm) and conducting cluster experiments. - . - This library provides bindings between mcl and OCaml. ===================================== debian/patches/series ===================================== @@ -1,4 +1,4 @@ -OCamlSupport.patch +# OCamlSupport.patch 02-wrong-interpreter-path.patch 05-manual-what-is.patch spelling.patch ===================================== debian/rules ===================================== @@ -60,7 +60,7 @@ confflags += --enable-blast docbackupdir:=$(CURDIR)/debian/doc.bak %: - dh $@ --with ocaml + dh $@ # --with ocaml override_dh_clean: dh_clean @@ -68,14 +68,17 @@ override_dh_clean: find . -name "*.zmt" -delete rm -rf doc/*.1 doc/*.html doc/*-html doc/*.ps rm -rf src/alien/oxygen/doc/*.1 src/alien/oxygen/doc/*.html src/alien/oxygen/doc/*.ps + if [ -d $(docbackupdir) ] ; then mv $(docbackupdir)/*.txt doc/ ; rm -rf $(docbackupdir) ; fi -override_dh_auto_build: - #dh_auto_build - autoreconf --install - oasis setup - ocaml setup.ml -all +#override_dh_auto_build: +# #dh_auto_build +# autoreconf --install +# oasis setup +# ocaml setup.ml -all override_dh_auto_configure: + mkdir -p $(docbackupdir) + cp -a doc/mcl*.txt $(docbackupdir) dh_auto_configure -- $(confflags) override_dh_install: View it on GitLab: https://salsa.debian.org/med-team/mcl/-/compare/251dc047bd7a15bce0b7b87428019769636fc903...399b97d4fd1b17db463f6ac687ee015b50a7ccf4 -- View it on GitLab: https://salsa.debian.org/med-team/mcl/-/compare/251dc047bd7a15bce0b7b87428019769636fc903...399b97d4fd1b17db463f6ac687ee015b50a7ccf4 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
