Michael R. Crusoe pushed to branch master at Debian Med / toil
Commits:
274ed606 by Michael R. Crusoe at 2025-01-30T10:58:56+01:00
d/rules: use DEB_BUILD_OPTION_PARALLEL instead of "auto" for setting the amount
of parallel testing.
- - - - -
2 changed files:
- debian/changelog
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
@@ -11,6 +11,8 @@ toil (7.0.0-1) UNRELEASED; urgency=medium
proxy configuration.
* d/rules: skip online tests
* d/patches/setting_version.patch: update for Python 3.12
+ * d/rules: use DEB_BUILD_OPTION_PARALLEL instead of "auto" for setting
+ the amount of parallel testing.
[ Andreas Tille ]
* Fix Python3.12 string syntax
=====================================
debian/rules
=====================================
@@ -1,6 +1,7 @@
#!/usr/bin/make -f
#export DH_VERBOSE = 1
+include /usr/share/dpkg/default.mk
export PYBUILD_NAME=toil
export PYBUILD_DESTDIR_python3=debian/toil/
@@ -23,7 +24,7 @@ override_dh_auto_install:
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
PYBUILD_SYSTEM=custom \
- PYBUILD_TEST_ARGS='TOIL_SKIP_ONLINE=true HOME={home_dir}
{interpreter} setup.py develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True
{interpreter} -m pytest -n auto --dist loadscope -vv -W ignore --ignore
src/toil/test/lib/aws/test_s3.py --ignore
src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore
src/toil/test/wdl/wdltoil_test.py --ignore src/toil/test/cwl/cwlTest.py
--ignore src/toil/test/src/promisedRequirementTest.py --ignore
src/toil/test/lib/test_ec2.py --ignore
src/toil/test/batchSystems/batchSystemTest.py --ignore
src/toil/test/lib/aws/test_iam.py --ignore
src/toil/test/provisioners/clusterTest.py --ignore
src/toil/test/wdl/wdltoil_test_kubernetes.py --ignore
src/toil/test/cactus/test_cactus_integration.py -k "not (test_bioconda or
test_run_conformance or testImportFtpFile or ToilWdlIntegrationTest or SortTest
or testCwlexample or testVirtualEnv or ToilDocumentationTest or
test_cwl_toil_kill or testImportReadFileCompatibility or CleanWorkDirTest or
DeferredFunctionTest or WdlToilTest or ToilKillTestWithAWSJobStore)"
{dir}/src/toil/test' \
+ PYBUILD_TEST_ARGS='TOIL_SKIP_ONLINE=true HOME={home_dir}
{interpreter} setup.py develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True
{interpreter} -m pytest $(DEB_BUILD_OPTION_PARALLEL:%=-n %) --dist loadscope
-vv -W ignore --ignore src/toil/test/lib/aws/test_s3.py --ignore
src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore
src/toil/test/wdl/wdltoil_test.py --ignore src/toil/test/cwl/cwlTest.py
--ignore src/toil/test/src/promisedRequirementTest.py --ignore
src/toil/test/lib/test_ec2.py --ignore
src/toil/test/batchSystems/batchSystemTest.py --ignore
src/toil/test/lib/aws/test_iam.py --ignore
src/toil/test/provisioners/clusterTest.py --ignore
src/toil/test/wdl/wdltoil_test_kubernetes.py --ignore
src/toil/test/cactus/test_cactus_integration.py -k "not (test_bioconda or
test_run_conformance or testImportFtpFile or ToilWdlIntegrationTest or SortTest
or testCwlexample or testVirtualEnv or ToilDocumentationTest or
test_cwl_toil_kill or testImportReadFileCompatibility or CleanWorkDirTest or
DeferredFunctionTest or WdlToilTest or ToilKillTestWithAWSJobStore)"
{dir}/src/toil/test' \
dh_auto_test
endif
View it on GitLab:
https://salsa.debian.org/med-team/toil/-/commit/274ed606059d0fa73e38c9dfca4ad1bb5f8d0ab1
--
View it on GitLab:
https://salsa.debian.org/med-team/toil/-/commit/274ed606059d0fa73e38c9dfca4ad1bb5f8d0ab1
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