Andrius Merkys pushed to branch master at Debian Med / ncbi-igblast
Commits:
a34b235c by Andrius Merkys at 2025-03-05T05:55:55-05:00
Add myself to uploaders.
- - - - -
363312f5 by Andrius Merkys at 2025-03-05T06:41:49-05:00
Update debian/changelog.
- - - - -
8339f35d by Andrius Merkys at 2025-03-05T06:42:25-05:00
Rework debian/source/lintian-overrides to format understood by FTP server.
- - - - -
3 changed files:
- debian/changelog
- debian/control
- debian/source/lintian-overrides
Changes:
=====================================
debian/changelog
=====================================
@@ -1,7 +1,6 @@
ncbi-igblast (1.20.0-1) UNRELEASED; urgency=medium
[ Andreas Tille ]
- * Team upload.
* Fix lintian-overrides
* Recommends: ncbi-blast+
* Install edit_imgt_file.pl and c++/src/app/igblast/internal_data
@@ -12,7 +11,7 @@ ncbi-igblast (1.20.0-1) UNRELEASED; urgency=medium
4-6.
[ Aaron M. Ucko ]
- * debian/igblast.install: Install correct build output.
+ * debian/igblast.install: Install correct build output (Closes: #1068442)
* debian/patches/avoid-gcc-crash.patch (new): Work around a consistent
internal compiler error whose fix may run into the toolchain freeze:
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=108137
@@ -24,7 +23,13 @@ ncbi-igblast (1.20.0-1) UNRELEASED; urgency=medium
[ Michael R. Crusoe ]
* build-dep on procps for the "ps" command.
- -- Aaron M. Ucko <[email protected]> Sun, 22 Jan 2023 13:39:13 -0500
+ [ Andrius Merkys ]
+ * Check if directory before cd'ing.
+ * Subdirectory internal_data/ has to stay for igblast to find its files
+ without patching.
+ * Add myself to uploaders.
+
+ -- Andrius Merkys <[email protected]> Wed, 05 Mar 2025 05:56:09 -0500
ncbi-igblast (1.19.0-1) unstable; urgency=medium
=====================================
debian/control
=====================================
@@ -3,7 +3,8 @@ Section: science
Priority: optional
Maintainer: Debian Med Packaging Team
<[email protected]>
Uploaders: David Miguel Susano Pinto <[email protected]>,
- Steffen Moeller <[email protected]>
+ Steffen Moeller <[email protected]>,
+ Andrius Merkys <[email protected]>
Build-Depends: debhelper-compat (= 13),
time,
libncbi-vdb-dev,
=====================================
debian/source/lintian-overrides
=====================================
@@ -1,9 +1,9 @@
# see https://lists.debian.org/debian-med/2022/03/msg00028.html
# Line length detection, nothing missing in source js files
# Aaron M. Ucko: These (short!) files have somewhat long lines, but TTBOMK are
meant to be edited directly as needed.
-ncbi-igblast source: source-is-missing [c++/src/html/ncbi_menu.js]
-ncbi-igblast source: source-is-missing [c++/src/html/ncbi_menu_dnd.js]
-ncbi-igblast source: source-is-missing [c++/src/html/ncbi_menu_dyn.js]
+source-is-missing c++/src/html/ncbi_menu.js
+source-is-missing c++/src/html/ncbi_menu_dnd.js
+source-is-missing c++/src/html/ncbi_menu_dyn.js
# JSON not evil license, related code is not present
# Aaron M. Ucko: As this file explains, the problematic JSON license applies
only to a jsonchecker subtree NCBI already doesn't redistribute
-ncbi-igblast source: license-problem-json-evil
[c++/include/misc/jsonwrapp/rapidjson11/license.txt]
+license-problem-json-evil c++/include/misc/jsonwrapp/rapidjson11/license.txt
View it on GitLab:
https://salsa.debian.org/med-team/ncbi-igblast/-/compare/3de90b715f037436cc4899ef9167298bbd00539d...8339f35d95acf3014f28768854f074a37c06b478
--
View it on GitLab:
https://salsa.debian.org/med-team/ncbi-igblast/-/compare/3de90b715f037436cc4899ef9167298bbd00539d...8339f35d95acf3014f28768854f074a37c06b478
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