Étienne Mollier pushed to branch master at Debian Med / bbmap
Commits: 6ae3d455 by Étienne Mollier at 2025-04-05T13:50:21+02:00 New upstream version 39.20+dfsg - - - - - 18f1ce01 by Étienne Mollier at 2025-04-05T13:50:30+02:00 Update upstream source from tag 'upstream/39.20+dfsg' Update to upstream version '39.20+dfsg' with Debian dir 7623607ce86b92292c6ded3604fe6576b0af13fe - - - - - 9bdbc006 by Étienne Mollier at 2025-04-05T13:51:54+02:00 d/control: depend on default-jre-headless. Closes: #1102122 - - - - - 8dd5957a by Étienne Mollier at 2025-04-05T14:06:31+02:00 d/changelog: ready for upload to unstable. - - - - - 61 changed files: - README.md - checkstrand.sh - current/aligner/MicroAligner3.java - + current/aligner/MicroWrapper.java - current/aligner/SideChannel3.java - current/barcode/CountBarcodes2.java - current/barcode/PCRMatrix.java - current/bin/AllToAllVectorMaker.java - current/bin/Bin.java - current/bin/BinObject.java - current/bin/BinStats.java - current/bin/Binner.java - current/bin/Cluster.java - current/bin/Contig.java - current/bin/ContigRenamer.java - current/bin/DataLoader.java - current/bin/GradeBins.java - current/bin/Key.java - + current/bin/KmerProb.java - current/bin/Oracle.java - current/bin/QuickBin.java - current/bin/RandomReadsMG.java - current/bin/SamLoader.java - current/bin/SimilarityMeasures.java - current/bin/SpectraCounter.java - current/fileIO/FileFormat.java - current/hiseq/PlotFlowCell.java - current/jgi/BBDuk.java - current/jgi/BBMerge.java - current/jgi/CheckStrand.java - current/jgi/CheckStrand2.java - current/jgi/RQCFilter2.java - current/jgi/Shred.java - current/ml/CellNet.java - current/ml/DataLoader.java - current/ml/Trainer.java - current/prok/Orf.java - current/shared/Shared.java - current/shared/Tools.java - current/stream/SamLine.java - current/structures/FloatList.java - current/structures/LongPair.java - current/structures/Range.java - debian/changelog - debian/control - gradebins.sh - makequickbinvector.sh - + microalign.sh - quickbin.sh - randomreadsmg.sh - + resources/phix_adapters.fa - + resources/polya.fa - + resources/polyc.fa - + resources/polyg.fa - + resources/polyt.fa - + resources/quickbin1D.bbnet - + resources/quickbin1D_all.bbnet - + resources/quickbinND.bbnet - + resources/quickbinND_all.bbnet - + resources/shred4merFractions.tsv - shred.sh The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/fc244d654ab42f5afcc9c43560ef9e57b6a0c9f1...8dd5957a87b1153274ef76e90f6719e283580673 -- View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/fc244d654ab42f5afcc9c43560ef9e57b6a0c9f1...8dd5957a87b1153274ef76e90f6719e283580673 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
