harish chavre pushed to branch upstream at Debian Med / bitseq
Commits: 8927d2e0 by Harish chavre at 2025-06-17T05:09:08+00:00 created gbp.conf - - - - - 5b46266b by Harish chavre at 2025-06-17T05:11:02+00:00 New upstream version 0.7.5+dfsg - - - - - 9 changed files: - + debian-tests-data/Reads.fastq - + debian-tests-data/Ref.fasta - + debian-tests-data/index.1.ebwt - + debian-tests-data/index.2.ebwt - + debian-tests-data/index.3.ebwt - + debian-tests-data/index.4.ebwt - + debian-tests-data/index.rev.1.ebwt - + debian-tests-data/index.rev.2.ebwt - + debian-tests-data/out.sam Changes: ===================================== debian-tests-data/Reads.fastq ===================================== @@ -0,0 +1,8 @@ +@read1 +ACGTACGTACGT ++ +IIIIIIIIIIII +@read2 +ACGTACGTACGT ++ +JJJJJJJJJJJJ ===================================== debian-tests-data/Ref.fasta ===================================== @@ -0,0 +1,2 @@ +>ref +ATGCTAGCATACGACTACAGCATACAGCATCAGACTACGACATCAGACTACAGCATACAGCAATACGACTACAGCATACGACTACAGCATCAGATGCTACGCAGACTACGACATCAGACTACAGCATACGACATCAGACTACTACAGACACAGACACGACGACGACGACTACGACACGACGACTACATCAGACGACGACAGCAGCAGCGACAGCAGACGACATACGACAGCATACGACGACAGACATCAGACGACGACGACGACGACGACGACGACCAGACGCATCAGCAGACACGACGAAAAAAAGGAGCATCAGCA ===================================== debian-tests-data/index.1.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.1.ebwt differ ===================================== debian-tests-data/index.2.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.2.ebwt differ ===================================== debian-tests-data/index.3.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.3.ebwt differ ===================================== debian-tests-data/index.4.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.4.ebwt differ ===================================== debian-tests-data/index.rev.1.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.rev.1.ebwt differ ===================================== debian-tests-data/index.rev.2.ebwt ===================================== Binary files /dev/null and b/debian-tests-data/index.rev.2.ebwt differ ===================================== debian-tests-data/out.sam ===================================== @@ -0,0 +1,5 @@ +@HD VN:1.0 SO:unsorted +@SQ SN:ref LN:318 +@PG ID:Bowtie VN:1.3.1 CL:"/usr/bin/bowtie-align-s --wrapper basic-0 -q -v 3 --all -m 100 --sam index Reads.fastq -S out.sam" +read1 4 * 0 0 * * 0 0 ACGTACGTACGT IIIIIIIIIIII XM:i:0 +read2 4 * 0 0 * * 0 0 ACGTACGTACGT JJJJJJJJJJJJ XM:i:0 View it on GitLab: https://salsa.debian.org/med-team/bitseq/-/compare/ebcd5e842eff36228eb7742306a08fa2b01c6cfa...5b46266bfcba234e735f51877127e099a0cc9da6 -- View it on GitLab: https://salsa.debian.org/med-team/bitseq/-/compare/ebcd5e842eff36228eb7742306a08fa2b01c6cfa...5b46266bfcba234e735f51877127e099a0cc9da6 You're receiving this email because of your account on salsa.debian.org.
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