Étienne Mollier pushed to branch master at Debian Med / libbpp-phyl-omics
Commits: 9dce89f6 by Étienne Mollier at 2025-09-26T21:53:41+02:00 cmake-4.patch: new: bump minimum cmake to 3.10. Closes: #1113117 - - - - - e4e02acb by Étienne Mollier at 2025-09-26T21:55:42+02:00 d/control: remove redundant Rules-Requires-Root: no. - - - - - 53621a2a by Étienne Mollier at 2025-09-26T21:55:56+02:00 d/watch: convert to v5 Github template. - - - - - 67dd9677 by Étienne Mollier at 2025-09-26T21:56:13+02:00 d/copyright: remove the old FSF address. - - - - - 0145c715 by Étienne Mollier at 2025-09-26T21:56:27+02:00 d/*lintian-overrides: remove unused t64 override. - - - - - 8730e00c by Étienne Mollier at 2025-09-26T21:57:07+02:00 d/*lintian-overrides: add conflicts-with-version override. - - - - - 6df560c2 by Étienne Mollier at 2025-09-26T21:57:31+02:00 d/s/lintian-overrides: glob d/control line number. This addresses mismatches due to variability in d/control file. - - - - - 45c04495 by Étienne Mollier at 2025-09-26T21:58:28+02:00 d/control: declare compliance to standards version 4.7.2. - - - - - 773f5207 by Étienne Mollier at 2025-09-26T22:02:14+02:00 d/changelog: ready for upload to unstable. - - - - - 8 changed files: - debian/changelog - debian/control - debian/copyright - debian/libbpp-phyl-omics3t64.lintian-overrides - + debian/patches/cmake-4.patch - debian/patches/series - debian/source/lintian-overrides - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,18 @@ +libbpp-phyl-omics (2.4.1-8) unstable; urgency=medium + + * Team upload. + * cmake-4.patch: new: bump minimum cmake to 3.10. (Closes: #1113117) + * d/control: remove redundant Rules-Requires-Root: no. + * d/watch: convert to v5 Github template. + * d/copyright: remove the old FSF address. + * d/*lintian-overrides: remove unused t64 override. + * d/*lintian-overrides: add conflicts-with-version override. + * d/s/lintian-overrides: glob d/control line number. + This addresses mismatches due to variability in d/control file. + * d/control: declare compliance to standards version 4.7.2. + + -- Étienne Mollier <[email protected]> Fri, 26 Sep 2025 21:58:45 +0200 + libbpp-phyl-omics (2.4.1-7) unstable; urgency=medium * Since every GCC version bump ends up in a bug caused by the need to ===================================== debian/control ===================================== @@ -9,11 +9,10 @@ Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), d-shlibs (>= 0.106~), libbpp-phyl-dev, libbpp-seq-omics-dev -Standards-Version: 4.7.0 +Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-phyl-omics Vcs-Git: https://salsa.debian.org/med-team/libbpp-phyl-omics.git Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page -Rules-Requires-Root: no Package: libbpp-phyl-omics-dev Architecture: any ===================================== debian/copyright ===================================== @@ -24,10 +24,6 @@ License: GPL-2+ but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - . - You should have received a copy of the GNU General Public License - along with this package; if not, write to the Free Software - Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the complete text of the GNU General Public License can be found in `/usr/share/common-licenses/GPL-2'. ===================================== debian/libbpp-phyl-omics3t64.lintian-overrides ===================================== @@ -1,2 +1,2 @@ -libbpp-phyl-omics3t64: package-name-doesnt-match-sonames libbpp-phyl-omics3 libbpp-phyl-omics3t64: no-symbols-control-file +libbpp-phyl-omics3t64: conflicts-with-version libbpp-phyl-omics3 (<< *) ===================================== debian/patches/cmake-4.patch ===================================== @@ -0,0 +1,19 @@ +Description: bump minimum cmake to 3.10. + This fixes errors and warnings caused by the bump to cmake 4. +Author: Étienne Mollier <[email protected]> +Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1113117 +Forwarded: no +Last-Update: 2025-09-26 +--- +This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ +--- libbpp-phyl-omics.orig/CMakeLists.txt ++++ libbpp-phyl-omics/CMakeLists.txt +@@ -5,7 +5,7 @@ + # Francois Gindraud (2017) + # Created: 30/07/2012 + +-cmake_minimum_required (VERSION 2.8.11) ++cmake_minimum_required (VERSION 3.10) + project (bpp-phyl-omics CXX) + + # Compile options ===================================== debian/patches/series ===================================== @@ -1 +1,2 @@ unforce-cxxflags.patch +cmake-4.patch ===================================== debian/source/lintian-overrides ===================================== @@ -1,2 +1,2 @@ # false positive from the t64 transition -libbpp-phyl-omics source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-phyl-omics3t64 -> libbpp-phyl-omics3 [debian/control:38] +libbpp-phyl-omics source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-phyl-omics3t64 -> libbpp-phyl-omics3 [debian/control:*] ===================================== debian/watch ===================================== @@ -1,4 +1,5 @@ -version=4 +Version: 5 -opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE@-$1.tar.gz%" \ - https://github.com/BioPP/bpp-phyl-omics/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) +Template: Github +Owner: BioPP +Project: bpp-phyl-omics View it on GitLab: https://salsa.debian.org/med-team/libbpp-phyl-omics/-/compare/f31ad2fa0d7043192088b5bf75e98bd09c9790de...773f52077329817b2b0049ea169f0f10497effa2 -- View it on GitLab: https://salsa.debian.org/med-team/libbpp-phyl-omics/-/compare/f31ad2fa0d7043192088b5bf75e98bd09c9790de...773f52077329817b2b0049ea169f0f10497effa2 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
