Étienne Mollier pushed to branch master at Debian Med / lamassemble
Commits: 7963cf80 by Étienne Mollier at 2025-11-15T17:30:49+01:00 New upstream version 1.7.4 - - - - - cf2d69ef by Étienne Mollier at 2025-11-15T17:30:50+01:00 Update upstream source from tag 'upstream/1.7.4' Update to upstream version '1.7.4' with Debian dir 731f531e760e180a593f18e1bcfccdad43b0bf1e - - - - - da58b854 by Étienne Mollier at 2025-11-15T17:31:26+01:00 d/control: declare compliance to standards version 4.7.2. - - - - - 5d64b589 by Étienne Mollier at 2025-11-15T17:31:46+01:00 d/control: drop redundant Rules-Requires-Root: no. - - - - - 753fd331 by Étienne Mollier at 2025-11-15T17:33:52+01:00 d/watch: convert to v5 Gitlab template. - - - - - 975f8a75 by Étienne Mollier at 2025-11-15T17:34:25+01:00 d/changelog: ready for upload to unstable. - - - - - 6 changed files: - README.md - debian/changelog - debian/control - debian/watch - lamassemble - setup.py Changes: ===================================== README.md ===================================== @@ -98,9 +98,9 @@ similarities by increasing option `-m` (and/or decreasing `-u` or `-W`). - `-c`, `--consensus`: just make a consensus, of already-aligned sequences. - `-f FMT`, `--format=FMT`: consensus output format, fasta/fa or - fastq/fq. Fastq shows the error probability of each base (assuming - the alignment is correct, so over-optimistic). The format name is - case-insensitive. + fastq/fq. Fastq shows -10 log<sub>10</sub> [error probability] of + each base (assuming the alignment is correct, so over-optimistic). + The format name is case-insensitive. - `-g G`, `--gap-max=G`: make the consensus sequence from alignment columns with <= G% gaps. ===================================== debian/changelog ===================================== @@ -1,3 +1,12 @@ +lamassemble (1.7.4-1) unstable; urgency=medium + + * New upstream version 1.7.4 + * d/control: declare compliance to standards version 4.7.2. + * d/control: drop redundant Rules-Requires-Root: no. + * d/watch: convert to v5 Gitlab template. + + -- Étienne Mollier <[email protected]> Sat, 15 Nov 2025 17:34:15 +0100 + lamassemble (1.7.2-2) unstable; urgency=medium * d/t/d/lama-tests.out: freshen output with python3.12. (Closes: #1074521) ===================================== debian/control ===================================== @@ -8,11 +8,10 @@ Build-Depends: dh-sequence-python3, python3-all, python3-setuptools, -Standards-Version: 4.7.0 +Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/lamassemble Vcs-Git: https://salsa.debian.org/med-team/lamassemble.git Homepage: https://gitlab.com/mcfrith/lamassemble -Rules-Requires-Root: no Package: lamassemble Architecture: all ===================================== debian/watch ===================================== @@ -1,5 +1,4 @@ -version=4 +Version: 5 -opts="mode=git" \ -https://gitlab.com/mcfrith/lamassemble.git \ -refs/tags/v?@ANY_VERSION@ +Template: Gitlab +Dist: https://gitlab.com/mcfrith/lamassemble ===================================== lamassemble ===================================== @@ -1,4 +1,4 @@ -#! /usr/bin/env python +#! /usr/bin/env python3 # Author: Martin C. Frith 2019 # SPDX-License-Identifier: MIT ===================================== setup.py ===================================== @@ -1,6 +1,6 @@ import setuptools -commitInfo = " (grafted, HEAD, tag: 1.7.2)".strip("( )").split() +commitInfo = " (grafted, HEAD, tag: 1.7.4)".strip("( )").split() version = commitInfo[commitInfo.index("tag:") + 1].rstrip(",") setuptools.setup( View it on GitLab: https://salsa.debian.org/med-team/lamassemble/-/compare/b408a5517df0b9e6234ed02dfa4747eacc2176fc...975f8a75c9c91ed0cb5c9116e601b313c73d30d1 -- View it on GitLab: https://salsa.debian.org/med-team/lamassemble/-/compare/b408a5517df0b9e6234ed02dfa4747eacc2176fc...975f8a75c9c91ed0cb5c9116e601b313c73d30d1 You're receiving this email because of your account on salsa.debian.org.
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