Étienne Mollier pushed to branch master at Debian Med / parsinsert
Commits:
6c8589dc by Étienne Mollier at 2026-01-06T22:07:31+01:00
d/rules: rearrange for better readability.
- - - - -
1 changed file:
- debian/rules
Changes:
=====================================
debian/rules
=====================================
@@ -1,38 +1,43 @@
#!/usr/bin/make -f
-# Hardening and lack of position independent executable are causing a number of
-# errors in parsinsert results when a number of compiler optimizations are
-# active. See #964082 for further details on the issue.
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
+
+# Lack of position independent executable is causing a number of errors
+# in parsinsert results. See #964082 for further details on the issue.
export DEB_CXXFLAGS_MAINT_APPEND = -fPIE
-# Also, although -fPIE does help on several platforms, a bunch of architectures
-# are still affected by the precision issue.
+
+# Also, although -fPIE does help on several platforms, a bunch of
+# architectures are still affected by precision issues.
UNOPTIMIZED_ARCHS := armel armhf mips64el ppc64el hppa ia64 powerpc ppc64 x32
ifneq (,$(filter $(DEB_BUILD_ARCH),$(UNOPTIMIZED_ARCHS)))
export DEB_CXXFLAGS_MAINT_APPEND = -O1
endif
-
%:
dh $@
execute_after_dh_auto_build:
mv ParsInsert parsinsert
-override_dh_auto_clean:
+execute_before_dh_auto_clean:
mv parsinsert ParsInsert || true
- dh_auto_clean
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
- cd debian/tests/test_data && \
- $(CURDIR)/parsinsert -d0 -c80 -n1 set1000.fasta -m lanemask.txt -x
rdp.taxonomy \
- -l set1000.log -o set1000.results -t core_rdp.ntree \
- -s core_rdp.fasta && \
- cmp -s right_results set1000.results || { \
- echo "incorrect result" ; \
- exit 1 ; } && \
- rm -f set1000.results set1000.tree
+ cd debian/tests/test_data \
+ && $(CURDIR)/parsinsert -d0 -c80 \
+ -n1 set1000.fasta \
+ -m lanemask.txt \
+ -x rdp.taxonomy \
+ -l set1000.log \
+ -o set1000.results \
+ -t core_rdp.ntree \
+ -s core_rdp.fasta \
+ && cmp -s right_results set1000.results \
+ || { echo "incorrect result" ; \
+ exit 1 ; \
+ } \
+ && rm -f set1000.results set1000.tree
endif
# Note a manpage was generated using:
View it on GitLab:
https://salsa.debian.org/med-team/parsinsert/-/commit/6c8589dc9afb75a9520974b8855b3b27913c5e90
--
View it on GitLab:
https://salsa.debian.org/med-team/parsinsert/-/commit/6c8589dc9afb75a9520974b8855b3b27913c5e90
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