Michael R. Crusoe pushed to branch master at Debian Med / cwltool
Commits: 28e065ff by Michael R. Crusoe at 2026-01-24T19:54:21+01:00 New upstream version - - - - - 6b723d75 by Michael R. Crusoe at 2026-01-24T19:54:22+01:00 New upstream version 3.1.20260108082145 - - - - - 71a31379 by Michael R. Crusoe at 2026-01-24T19:54:34+01:00 Update upstream source from tag 'upstream/3.1.20260108082145' Update to upstream version '3.1.20260108082145' with Debian dir 5ea4794ea0e3bf09597cfb114ca5e049a20c5d54 - - - - - d12a5300 by Michael R. Crusoe at 2026-01-24T20:57:15+01:00 Refreshed patches. - - - - - 2feb336c by Michael R. Crusoe at 2026-01-24T21:08:50+01:00 release - - - - - 119 changed files: - .github/workflows/ci-tests.yml - .github/workflows/codeql-analysis.yml - .github/workflows/quay-publish.yml - .github/workflows/wheels.yml - CONTRIBUTING.md - MANIFEST.in - Makefile - PKG-INFO - README.rst - cwltool.egg-info/PKG-INFO - cwltool.egg-info/SOURCES.txt - cwltool.egg-info/requires.txt - cwltool/_version.py - cwltool/argparser.py - cwltool/builder.py - cwltool/checker.py - cwltool/command_line_tool.py - cwltool/context.py - cwltool/cuda.py - cwltool/cwlprov/__init__.py - cwltool/cwlprov/provenance_profile.py - cwltool/cwlprov/ro.py - cwltool/cwlprov/writablebagfile.py - cwltool/cwlrdf.py - cwltool/docker.py - cwltool/docker_id.py - cwltool/executors.py - cwltool/extensions-v1.1.yml - cwltool/extensions-v1.2.yml - cwltool/extensions-v1.3.yml - cwltool/extensions.yml - cwltool/factory.py - cwltool/flatten.py - cwltool/job.py - cwltool/load_tool.py - cwltool/main.py - cwltool/mpi.py - cwltool/pack.py - cwltool/pathmapper.py - cwltool/process.py - cwltool/procgenerator.py - cwltool/resolver.py - cwltool/run_job.py - cwltool/secrets.py - cwltool/singularity.py - cwltool/singularity_utils.py - cwltool/software_requirements.py - cwltool/stdfsaccess.py - cwltool/subgraph.py - cwltool/task_queue.py - cwltool/update.py - cwltool/utils.py - cwltool/validate_js.py - cwltool/workflow.py - cwltool/workflow_job.py - debian/changelog - debian/patches/disable_prov - docs/Makefile - mypy-requirements.txt - mypy-stubs/arcp/parse.pyi - mypy-stubs/bagit.pyi - mypy-stubs/prov/constants.py - mypy-stubs/prov/identifier.pyi - mypy-stubs/prov/model.pyi - mypy-stubs/rdflib/collection.pyi - mypy-stubs/rdflib/graph.pyi - mypy-stubs/rdflib/namespace/__init__.pyi - mypy-stubs/rdflib/paths.pyi - mypy-stubs/rdflib/plugin.pyi - mypy-stubs/rdflib/query.pyi - mypy-stubs/rdflib/resource.pyi - mypy-stubs/rdflib/term.pyi - mypy-stubs/spython/main/__init__.pyi - mypy-stubs/spython/main/build.pyi - mypy-stubs/spython/main/parse/recipe.pyi - mypy-stubs/spython/main/parse/writers/singularity.pyi - pyproject.toml - requirements.txt - setup.py - test-requirements.txt - tests/cwl-conformance/cwltool-conftest.py - + tests/loop-ext/value-from-loop-2.cwl - + tests/loop-ext/value-from-loop-3.cwl - + tests/loop/value-from-loop-2.cwl - + tests/loop/value-from-loop-3.cwl - + tests/sing_dockerfile_named_test.cwl - + tests/sing_dockerfile_test.cwl - + tests/sing_local_sandbox_img_id_test.cwl - + tests/sing_local_sandbox_test.cwl - + tests/test-cwl-out-v1.0.cwl - + tests/test-cwl-out-v1.1.cwl - + tests/test-cwl-out-v1.2.cwl - + tests/test-cwl-out-v1.3.cwl - tests/test_cuda.py - + tests/test_cwl_output_json.py - tests/test_dependencies.py - tests/test_docker.py - tests/test_environment.py - tests/test_examples.py - tests/test_ext.py - tests/test_fetch.py - tests/test_iwdr.py - tests/test_loop.py - tests/test_loop_ext.py - tests/test_mpi.py - tests/test_parallel.py - tests/test_procgenerator.py - tests/test_rdfprint.py - tests/test_secrets.py - tests/test_singularity.py - tests/test_singularity_versions.py - tests/test_subgraph.py - tests/test_tmpdir.py - tests/test_toolargparse.py - tests/test_trs.py - tests/test_udocker.py - tests/util.py - + tests/wf/hello_gpu.cwl - tox.ini The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/cwltool/-/compare/7b3a918b3b379bb07ae01c3f50806165b2f0b2ef...2feb336c85af2db0c6d40050ee0c3595ad088ddb -- View it on GitLab: https://salsa.debian.org/med-team/cwltool/-/compare/7b3a918b3b379bb07ae01c3f50806165b2f0b2ef...2feb336c85af2db0c6d40050ee0c3595ad088ddb You're receiving this email because of your account on salsa.debian.org.
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