Étienne Mollier pushed to branch upstream at Debian Med / vsearch
Commits: bffd9ffa by Étienne Mollier at 2026-02-16T22:00:42+01:00 New upstream version 2.30.4 - - - - - 113 changed files: - + .github/workflows/build-all.yml - + .github/workflows/build-and-test.yml - LICENSE.txt - README.md - configure.ac - man/vsearch.1 - src/align_simd.cc - src/align_simd.h - src/allpairs.cc - src/allpairs.h - src/arch.cc - src/arch.h - src/attributes.cc - src/attributes.h - src/bitmap.cc - src/bitmap.h - src/chimera.cc - src/chimera.h - src/cluster.cc - src/cluster.h - src/cpu.cc - src/cpu.h - src/cut.cc - src/cut.h - src/db.cc - src/db.h - src/dbhash.cc - src/dbhash.h - src/dbindex.cc - src/dbindex.h - src/derep.cc - src/derep.h - src/derep_prefix.cc - src/derep_prefix.h - src/derep_smallmem.cc - src/derep_smallmem.h - src/dynlibs.cc - src/dynlibs.h - src/eestats.cc - src/eestats.h - src/fasta.cc - src/fasta.h - src/fasta2fastq.cc - src/fasta2fastq.h - src/fastq.cc - src/fastq.h - src/fastq_chars.cc - src/fastq_chars.h - src/fastq_join.cc - src/fastq_join.h - src/fastq_mergepairs.cc - src/fastq_mergepairs.h - src/fastq_stats.cc - src/fastq_stats.h - src/fastqops.cc - src/fastqops.h - src/fastx.cc - src/fastx.h - src/filter.cc - src/filter.h - src/getseq.cc - src/getseq.h - src/kmerhash.cc - src/kmerhash.h - src/linmemalign.cc - src/linmemalign.h - src/mask.cc - src/mask.h - src/minheap.cc - src/minheap.h - src/msa.cc - src/msa.h - src/orient.cc - src/orient.h - src/otutable.cc - src/otutable.h - src/rereplicate.cc - src/rereplicate.h - src/results.cc - src/results.h - src/search.cc - src/search.h - src/search_exact.cc - src/search_exact.h - src/searchcore.cc - src/searchcore.h - src/sff_convert.cc - src/sff_convert.h - src/showalign.cc - src/showalign.h - src/shuffle.cc - src/shuffle.h - src/sintax.cc - src/sintax.h - src/sortbylength.cc - src/sortbylength.h - src/sortbysize.cc - src/sortbysize.h - src/subsample.cc - src/subsample.h - src/tax.cc - src/tax.h - src/udb.cc - src/udb.h - src/unique.cc - src/unique.h - src/userfields.cc - src/userfields.h - src/util.cc - src/util.h - src/vsearch.cc - src/vsearch.h - src/xstring.h The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/vsearch/-/commit/bffd9ffaea63f98c6c50797767e70a1db6db7524 -- View it on GitLab: https://salsa.debian.org/med-team/vsearch/-/commit/bffd9ffaea63f98c6c50797767e70a1db6db7524 You're receiving this email because of your account on salsa.debian.org.
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