Alexandre Detiste pushed to branch master at Debian Med / 
python-intervaltree-bio


Commits:
e38962fa by Alexandre Detiste at 2026-02-27T14:11:12+01:00
wrap-and-sort -ast

- - - - -
e52d4ea3 by Alexandre Detiste at 2026-02-27T14:11:32+01:00
drop "Rules-Requires-Root: no": this is the default now

- - - - -
47a4963b by Alexandre Detiste at 2026-02-27T14:11:59+01:00
bump Standards-Version: to 4.7.3, drop Priority: tag

- - - - -
cc76c94d by Alexandre Detiste at 2026-02-27T14:12:25+01:00
use dh-sequence-python3

- - - - -
3f88801e by Alexandre Detiste at 2026-02-27T14:13:12+01:00
rewrite d/watch in v5 format

- - - - -
f8b7ad9e by Alexandre Detiste at 2026-02-27T14:13:50+01:00
autopkgtest does not need "quilt"

- - - - -
205b0bbc by Alexandre Detiste at 2026-02-27T14:14:28+01:00
disable useless Salsa CI jobs

- - - - -
7fde9f3f by Alexandre Detiste at 2026-02-27T14:14:46+01:00
rename file under debian/ for debhelper 15 compatibility

- - - - -


7 changed files:

- debian/control
- debian/docs → debian/python3-intervaltree-bio.docs
- debian/rules
- debian/salsa-ci.yml
- debian/tests/control
- debian/tests/run-unit-test
- debian/watch


Changes:

=====================================
debian/control
=====================================
@@ -1,25 +1,26 @@
 Source: python-intervaltree-bio
 Maintainer: Debian Med Packaging Team 
<[email protected]>
-Uploaders: Andreas Tille <[email protected]>
+Uploaders:
+ Andreas Tille <[email protected]>,
 Section: python
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               dh-python,
-               python3-all,
-               python3-setuptools,
-               python3-intervaltree,
-               python3-pytest <!nocheck>
-Standards-Version: 4.5.0
+Build-Depends:
+ debhelper-compat (= 13),
+ dh-sequence-python3,
+ python3-all,
+ python3-intervaltree,
+ python3-pytest <!nocheck>,
+ python3-setuptools,
+Standards-Version: 4.7.3
 Vcs-Browser: https://salsa.debian.org/med-team/python-intervaltree-bio
 Vcs-Git: https://salsa.debian.org/med-team/python-intervaltree-bio.git
 Homepage: https://github.com/konstantint/intervaltree-bio
-Rules-Requires-Root: no
 
 Package: python3-intervaltree-bio
 Architecture: all
-Depends: ${misc:Depends},
-         ${python3:Depends},
-         python3-intervaltree
+Depends:
+ python3-intervaltree,
+ ${misc:Depends},
+ ${python3:Depends},
 Description: Interval tree convenience classes for genomic data -- Python 3 
library
  Convenience classes for loading UCSC genomic annotation records into
  a set of interval tree data structures.


=====================================
debian/docs → debian/python3-intervaltree-bio.docs
=====================================


=====================================
debian/rules
=====================================
@@ -8,7 +8,7 @@ export LC_ALL = C.UTF-8
 export PYBUILD_NAME=intervaltree-bio
 
 %:
-       dh $@ --with python3 --buildsystem=pybuild
+       dh $@ --buildsystem=pybuild
 
 override_dh_auto_test:
 ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))


=====================================
debian/salsa-ci.yml
=====================================
@@ -1,4 +1,8 @@
 ---
 include:
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
-  - 
https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
+  - 
https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml
+
+variables:
+  SALSA_CI_DISABLE_BLHC: 1
+  SALSA_CI_DISABLE_BUILD_PACKAGE_ALL: 1
+  SALSA_CI_DISABLE_BUILD_PACKAGE_ANY: 1


=====================================
debian/tests/control
=====================================
@@ -1,3 +1,8 @@
-Tests: run-unit-test
-Depends: @, python3-pytest, quilt
-Restrictions: rw-build-tree, allow-stderr
+Tests:
+ run-unit-test,
+Depends:
+ python3-pytest,
+ @,
+Restrictions:
+ allow-stderr,
+ rw-build-tree,


=====================================
debian/tests/run-unit-test
=====================================
@@ -1,8 +1,6 @@
 #!/bin/bash
 set -e
 
-QUILT_PATCHES=debian/patches quilt push -a || true
 python3 -m pytest --ignore=.pc -v --datadir `pwd`/debian/data
-QUILT_PATCHES=debian/patches quilt pop -a || true
 
 echo "PASS"


=====================================
debian/watch
=====================================
@@ -1,4 +1,5 @@
-version=3
+Version: 5
 
-opts="filenamemangle=s/(?:.*?)?v?(\d[\d.]*)\.tar\.gz/python-intervaltree-bio-$1.tar.gz/"
 \
-https://github.com/konstantint/intervaltree-bio/tags 
(?:.*?/)?v?(\d[\d.]*)\.tar\.gz
+Template: GitHub
+Owner: konstantint
+Project: intervaltree-bio



View it on GitLab: 
https://salsa.debian.org/med-team/python-intervaltree-bio/-/compare/e99e090afbfa4e530a9865a2653cea9733c9c327...7fde9f3f84c3f13ea640758a124f06ca0e8d0b15

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/python-intervaltree-bio/-/compare/e99e090afbfa4e530a9865a2653cea9733c9c327...7fde9f3f84c3f13ea640758a124f06ca0e8d0b15
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