Andreas Tille pushed to branch master at Debian Med / kallisto
Commits: 919b8d13 by Andreas Tille at 2026-05-22T22:25:48+02:00 Do not build with -march=native Closes: #1128956 - - - - - 3 changed files: - debian/changelog - + debian/patches/baseline.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +kallisto (0.51.1+dfsg-2) UNRELEASED; urgency=medium + + [ Adrian Bunk ] + * Do not build with -march=native + Closes: #1128956 + + -- Andreas Tille <[email protected]> Fri, 22 May 2026 22:24:48 +0200 + kallisto (0.51.1+dfsg-1) unstable; urgency=medium [ Andreas Tille ] ===================================== debian/patches/baseline.patch ===================================== @@ -0,0 +1,17 @@ +Author: Adrian Bunk <[email protected]> +Last-Update: 2026-02-24 +Bug-Debian: https://bugs.debian.org/1128956 +Description: Do not build with -march=native + +--- a/ext/bifrost/CMakeLists.txt ++++ b/ext/bifrost/CMakeLists.txt +@@ -8,7 +8,8 @@ find_package(Threads REQUIRED) + SET(MAX_KMER_SIZE "31" CACHE STRING "MAX_KMER_SIZE") + SET(MAX_GMER_SIZE "63" CACHE STRING "MAX_GMER_SIZE") + # Enable architecture optimizations +-SET(COMPILATION_ARCH "native" CACHE STRING "COMPILATION_ARCH") ++# SET(COMPILATION_ARCH "native" CACHE STRING "COMPILATION_ARCH") ++SET(COMPILATION_ARCH "OFF" CACHE STRING "COMPILATION_ARCH") + # Enable AVX2 instructions + SET(ENABLE_AVX2 "ON" CACHE STRING "ENABLE_AVX2") + ===================================== debian/patches/series ===================================== @@ -8,3 +8,4 @@ bifrost_typo.patch std_gnu17.patch cmake4.patch fix_testing.patch +baseline.patch View it on GitLab: https://salsa.debian.org/med-team/kallisto/-/commit/919b8d139f02be7e4c7da2b1c7f36ec3895b5bb5 -- View it on GitLab: https://salsa.debian.org/med-team/kallisto/-/commit/919b8d139f02be7e4c7da2b1c7f36ec3895b5bb5 You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
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