Author: tbooth-guest Date: 2012-08-10 17:22:42 +0000 (Fri, 10 Aug 2012) New Revision: 12034
Modified: trunk/packages/python-biom-format/trunk/debian/changelog trunk/packages/python-biom-format/trunk/debian/get-orig-source trunk/packages/python-biom-format/trunk/debian/patches/enable_cython_beta.patch trunk/packages/python-biom-format/trunk/debian/rules Log: Small changes that helped me build on Ubuntu Modified: trunk/packages/python-biom-format/trunk/debian/changelog =================================================================== --- trunk/packages/python-biom-format/trunk/debian/changelog 2012-08-10 17:13:59 UTC (rev 12033) +++ trunk/packages/python-biom-format/trunk/debian/changelog 2012-08-10 17:22:42 UTC (rev 12034) @@ -1,3 +1,10 @@ +python-biom-format (1.0.0-1ubuntu1) precise; urgency=low + + * Rebuild for Precise + * Minor changes to cleanup and get-orig-source that helped me + + -- Tim Booth <[email protected]> Fri, 10 Aug 2012 18:08:06 +0100 + python-biom-format (1.0.0-1) unstable; urgency=low * Initial release (Closes: #682242) Modified: trunk/packages/python-biom-format/trunk/debian/get-orig-source =================================================================== --- trunk/packages/python-biom-format/trunk/debian/get-orig-source 2012-08-10 17:13:59 UTC (rev 12033) +++ trunk/packages/python-biom-format/trunk/debian/get-orig-source 2012-08-10 17:22:42 UTC (rev 12034) @@ -1,12 +1,12 @@ #!/bin/sh -# get source for beast-mcmc from SVN because there is no source tarball distribution +# Repack tarball because of ._ files set -e NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'` UNAME=`echo $NAME | sed 's/^python-//'` if ! echo $@ | grep -q upstream-version ; then - VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/\([0-9\.]\+\)-[0-9]\+$/\1/'` + VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/\([0-9\.]\+\)-.\+$/\1/'` uscan --force-download else VERSION=`echo $@ | sed "s?^.*--upstream-version \([0-9.]\+\) .*${NAME}.*?\1?"` Modified: trunk/packages/python-biom-format/trunk/debian/patches/enable_cython_beta.patch =================================================================== --- trunk/packages/python-biom-format/trunk/debian/patches/enable_cython_beta.patch 2012-08-10 17:13:59 UTC (rev 12033) +++ trunk/packages/python-biom-format/trunk/debian/patches/enable_cython_beta.patch 2012-08-10 17:22:42 UTC (rev 12034) @@ -7,8 +7,8 @@ - in case of to low Cython versions just install a copy of the created C++ code from 0.17~beta ---- biom-format-1.0.0.orig/setup.py -+++ biom-format-1.0.0/setup.py +--- a/setup.py ++++ b/setup.py @@ -5,6 +5,7 @@ from os.path import join, split from os import getcwd @@ -17,7 +17,7 @@ __author__ = "Daniel McDonald" __copyright__ = "Copyright 2012, The BIOM Format" -@@ -25,7 +26,7 @@ +@@ -25,11 +26,15 @@ import Cython from Cython.Distutils import build_ext @@ -26,9 +26,6 @@ if cy_version >= (0, 14, 1): cython_present = True else: -@@ -31,6 +31,10 @@ - cython_present = True - else: cython_present = False + if cy_version >= (0, 17, 0): + cython_works_with_gcc47 = True @@ -37,7 +34,7 @@ except ImportError: cython_present = False -@@ -52,7 +56,10 @@ +@@ -51,7 +56,10 @@ if cython_present: from subprocess import Popen, PIPE from os import system Modified: trunk/packages/python-biom-format/trunk/debian/rules =================================================================== --- trunk/packages/python-biom-format/trunk/debian/rules 2012-08-10 17:13:59 UTC (rev 12033) +++ trunk/packages/python-biom-format/trunk/debian/rules 2012-08-10 17:22:42 UTC (rev 12034) @@ -25,6 +25,7 @@ override_dh_auto_clean: dh_auto_clean + find -name "._*" -exec rm -f '{}' ';' #Needed if you try to build from pristine tarball rm -rf python-code/support-code/_sparsemat.cpp override_dh_install: _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
