Karsten Schöke pushed to branch master at Debian Med / python-biopython
Commits: a8c8cc53 by Karsten Schöke at 2026-08-07T13:41:24+02:00 New upstream version 1.88+dfsg - - - - - dac8435c by Karsten Schöke at 2026-08-07T13:42:27+02:00 Update upstream source from tag 'upstream/1.88+dfsg' Update to upstream version '1.88+dfsg' with Debian dir 8c2083fedc8c6bc2b2ce13b36722da0ef3eccaff - - - - - 5dcb2c8c by Karsten Schöke at 2026-08-07T13:42:57+02:00 Changes made by cme - - - - - d795c9d0 by Karsten Schöke at 2026-08-07T12:43:15+01:00 Set upstream metadata fields: Documentation, Repository, Repository-Browse, Security-Contact. Changes-By: lintian-brush Fixes: lintian: source: upstream-metadata-missing-repository [debian/upstream/metadata] See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html - - - - - 71c89091 by Karsten Schöke at 2026-08-07T13:43:20+02:00 debputy lint --auto-fix (routine-update) - - - - - 263b4aa7 by Karsten Schöke at 2026-08-07T16:17:11+02:00 upstream change to PEP-517. - - - - - 8cfa6eae by Karsten Schöke at 2026-08-07T16:19:06+02:00 d/rules: Fix FTBR: The second build is invoked with the `nocheck` option and therefore fails. - - - - - 440f7b51 by Karsten Schöke at 2026-08-07T17:13:23+02:00 d/rules: Delete unnecessary top_level.txt - - - - - e358b5dc by Karsten Schöke at 2026-08-07T17:15:05+02:00 Update changelog for 1.88+dfsg-1 release - - - - - 73 changed files: - .appveyor.yml - .circleci/config.yml - .github/deploy_docs.sh - .github/workflows/ci.yml - .mypy.ini - .pre-commit-config.yaml - Bio/Affy/CelFile.py - Bio/Align/AlignInfo.py - Bio/Align/__init__.py - Bio/Align/bigbed.py - Bio/Align/bigmaf.py - Bio/Align/bigpsl.py - Bio/Align/sam.py - Bio/Blast/_parser.py - Bio/GenBank/Record.py - Bio/GenBank/Scanner.py - Bio/Nexus/Nexus.py - Bio/Nexus/Trees.py - Bio/PDB/Atom.py - Bio/PDB/PDBIO.py - Bio/PDB/internal_coords.py - Bio/PDB/vectors.py - Bio/Pathway/__init__.py - Bio/Phylo/BaseTree.py - Bio/Phylo/CDAO.py - Bio/Phylo/NewickIO.py - Bio/Restriction/Restriction.py - Bio/SearchIO/InfernalIO/infernal_tab.py - Bio/SearchIO/_model/hsp.py - Bio/Seq.py - Bio/SeqIO/AceIO.py - Bio/SeqIO/FastaIO.py - Bio/SeqIO/GckIO.py - Bio/SeqIO/GfaIO.py - Bio/SeqIO/Interfaces.py - Bio/SeqIO/PdbIO.py - Bio/SeqIO/PhdIO.py - Bio/SeqIO/QualityIO.py - Bio/SeqIO/SffIO.py - Bio/SeqIO/SnapGeneIO.py - Bio/SeqIO/SwissIO.py - Bio/SeqIO/TabIO.py - Bio/SeqIO/UniprotIO.py - Bio/SeqIO/XdnaIO.py - Bio/SeqIO/__init__.py - Bio/SeqRecord.py - Bio/__init__.py - Bio/motifs/jaspar/db.py - Bio/pairwise2.py - BioSQL/BioSeqDatabase.py - CONTRIB.rst - CONTRIBUTING.rst - DEPRECATED.rst - Doc/Tutorial/chapter_motifs.rst - Doc/Tutorial/chapter_pairwise.rst - NEWS.rst - README.rst - Scripts/Restriction/ranacompiler.py - Tests/common_BioSQL.py - Tests/seq_tests_common.py - Tests/test_Align_Alignment.py - Tests/test_Align_bigbed.py - Tests/test_Align_psl.py - Tests/test_GenBank.py - Tests/test_PDB_alphafold_db.py - Tests/test_Phylo.py - debian/changelog - debian/control - debian/python3-biopython.install - debian/rules - debian/upstream/metadata - debian/watch - − hht2+-1000.dna The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/f8a6318925b469010cbec7130bf017bdd29c935a...e358b5dc59b531d993cfef868e4617233456a4e5 -- View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/f8a6318925b469010cbec7130bf017bdd29c935a...e358b5dc59b531d993cfef868e4617233456a4e5 You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
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