Author: osallou Date: 2012-10-04 16:25:46 +0000 (Thu, 04 Oct 2012) New Revision: 12310
Added: trunk/packages/biomaj/trunk/debian/patches/set_env_file_for_debian Modified: trunk/packages/biomaj/trunk/debian/changelog trunk/packages/biomaj/trunk/debian/patches/series Log: Add patch to prevent shipped file update by program Modified: trunk/packages/biomaj/trunk/debian/changelog =================================================================== --- trunk/packages/biomaj/trunk/debian/changelog 2012-10-03 11:54:42 UTC (rev 12309) +++ trunk/packages/biomaj/trunk/debian/changelog 2012-10-04 16:25:46 UTC (rev 12310) @@ -1,3 +1,11 @@ +biomaj (1.2.0-9) UNRELEASED; urgency=low + + * debian/patches/set_env_file_for_debian: + Prevent env.sh file update by program at install + (Closes: #688433) + + -- Olivier Sallou <[email protected]> Wed, 03 Oct 2012 13:54:44 +0200 + biomaj (1.2.0-8) unstable; urgency=low [ Olivier Sallou ] @@ -2,3 +10,3 @@ * debian/copyright: Fix copyright URL - * dbeian/control: Switch to Standards 3.9.4 + * debian/control: Switch to Standards 3.9.4 * debian/rules, debian/postinst, debian/postrm: fix conffile update Modified: trunk/packages/biomaj/trunk/debian/patches/series =================================================================== --- trunk/packages/biomaj/trunk/debian/patches/series 2012-10-03 11:54:42 UTC (rev 12309) +++ trunk/packages/biomaj/trunk/debian/patches/series 2012-10-04 16:25:46 UTC (rev 12310) @@ -1 +1,2 @@ removeSqlToolDependency +set_env_file_for_debian Added: trunk/packages/biomaj/trunk/debian/patches/set_env_file_for_debian =================================================================== --- trunk/packages/biomaj/trunk/debian/patches/set_env_file_for_debian (rev 0) +++ trunk/packages/biomaj/trunk/debian/patches/set_env_file_for_debian 2012-10-04 16:25:46 UTC (rev 12310) @@ -0,0 +1,28 @@ +Subject: Prevent shipped file modification +Description: Program updates a shipped file at install + and upgrades. Patch sets the file once and prevent + program update. +Forwarded: not-needed +Author: Olivier Sallou <[email protected]> +Last-Updated: 2012-10-04 +Bug: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=688433 +--- a/usr/share/biomaj/bin/Configurator.java ++++ b/usr/share/biomaj/bin/Configurator.java +@@ -117,7 +117,7 @@ + /* + * Creer env.sh + */ +- createEnv(params.get("ant_home"), params.get("java_home")); ++ //createEnv(params.get("ant_home"), params.get("java_home")); + + + log("Configuration complete"); +--- a/usr/share/biomaj/bin/env.sh ++++ b/usr/share/biomaj/bin/env.sh +@@ -1 +1,4 @@ +-#!/bin/sh +\ No newline at end of file ++#!/bin/sh ++export JAVA_HOME=$(readlink -f /usr/bin/javac | sed "s:bin/javac::") ++export ANT_HOME=/usr/share/ant ++export BIOMAJ_ROOT=/usr/share/biomaj _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
