Author: smr Date: 2012-10-14 05:10:13 +0000 (Sun, 14 Oct 2012) New Revision: 12408
Added: trunk/packages/minc/tags/2.2.00-1/ trunk/packages/minc/tags/2.2.00-1/debian/changelog trunk/packages/minc/tags/2.2.00-1/debian/control trunk/packages/minc/tags/2.2.00-1/debian/patches/makefile.patch trunk/packages/minc/tags/2.2.00-1/debian/patches/series trunk/packages/minc/tags/2.2.00-1/debian/rules Removed: trunk/packages/minc/tags/2.2.00-1/debian/changelog trunk/packages/minc/tags/2.2.00-1/debian/control trunk/packages/minc/tags/2.2.00-1/debian/patches/series trunk/packages/minc/tags/2.2.00-1/debian/rules Log: [svn-buildpackage] Tagging minc 2.2.00-1 Deleted: trunk/packages/minc/tags/2.2.00-1/debian/changelog =================================================================== --- trunk/packages/minc/trunk/debian/changelog 2012-10-13 09:02:00 UTC (rev 12403) +++ trunk/packages/minc/tags/2.2.00-1/debian/changelog 2012-10-14 05:10:13 UTC (rev 12408) @@ -1,344 +0,0 @@ -minc (2.2.00-1) unstable; urgency=low - - * New upstream. - * patches/hdfv2-fixes.patch: Remove. Applied upstream. - - -- Steve M. Robbins <[email protected]> Thu, 11 Oct 2012 21:21:09 -0500 - -minc (2.1.10-1) unstable; urgency=low - - * New upstream. - - * patches/03_mincview.diff: Remove. Script mincview rewritten to use - Imagemagick - - * patches/decompress-whole-file.diff: - * patches/read_file_names-refactor.patch: Remove. Applied upstream. - * rules: Remove use of dh_autoreconf. - - * patches/hdfv2-fixes.patch: New. Ensure using HDF5 v2 API. - - * control: Remove dependency and build-dependency on csh. - - -- Steve M. Robbins <[email protected]> Sun, 26 Feb 2012 01:37:47 -0600 - -minc (2.1.00-5) unstable; urgency=low - - * patches/mincaverage-pathmax.patch: Remove. - * patches/read_file_names-refactor.patch: New. Refactored duplicated - PATH_MAX-using code into library. Need to run autoreconf because - Makefile.am changed. - - * rules: Fix errors and really disable tests on sparc. - - -- Steve M. Robbins <[email protected]> Mon, 20 Feb 2012 15:00:32 -0600 - -minc (2.1.00-4) unstable; urgency=low - - * source/format: Set to 3.0 (quilt), so that patches are applied. - - * patches/mincaverage-pathmax.patch: New. Work around missing PATH_MAX - definition; fixes FTBFS on hurd. - - * rules: Tests are buggy, but do work on most architectures. Disable on - sparc. - - -- Steve M. Robbins <[email protected]> Sun, 19 Feb 2012 21:58:51 -0600 - -minc (2.1.00-3) unstable; urgency=low - - * control: Switch to (serial) libhdf5-dev, to avoid conflict with serial - netcdf. Closes: #658307. - - * control: - * rules: Switch from cdbs to debhelper's dh (compat level 9). - - -- Steve M. Robbins <[email protected]> Sun, 19 Feb 2012 08:53:04 -0600 - -minc (2.1.00-2) unstable; urgency=low - - * patches/decompress-whole-file.diff: New. Always decompress entire - file to support compressed MINC2 files. Closes: #585676. - - -- Steve M. Robbins <[email protected]> Sun, 18 Dec 2011 20:47:03 -0600 - -minc (2.1.00-1) unstable; urgency=low - - * New upstream. - - -- Steve M. Robbins <[email protected]> Tue, 17 Aug 2010 22:26:16 -0500 - -minc (2.0.18+cvs20100518-1) unstable; urgency=low - - * Pull upstream CVS, contains fixes for netcdf 4. Closes: #577060, - #581296. - - * control: replace libhdf5-*-dev (differing by architecture) by - libhdf5-mpi-dev. - - -- Steve M. Robbins <[email protected]> Tue, 18 May 2010 22:53:30 -0500 - -minc (2.0.18-1) unstable; urgency=low - - * New upstream version. - - -- Steve M. Robbins <[email protected]> Mon, 20 Jul 2009 05:24:57 -0500 - -minc (2.0.17-1) unstable; urgency=low - - * New upstream version. - - * patches/04_manpages.diff: - * debian/patches/05_parseargv.diff: Remove; applied upstream. - - -- Steve M. Robbins <[email protected]> Tue, 20 Jan 2009 19:37:41 -0600 - -minc (2.0.16-4) unstable; urgency=low - - * debian/patches/05_parseargv.diff: New. Patch from upstream to fix arg - parsing on 64bits. Closes: #510629. This was also the root cause of - mincheader and mincdiff failing. Closes: #506276. - - * debian/control: Add ${misc:Depends}, since we use debhelper. - - * debian/rules: Do not install test code acr_test, dicom_test. - - -- Steve M. Robbins <[email protected]> Sat, 03 Jan 2009 16:29:06 -0600 - -minc (2.0.16-3) unstable; urgency=low - - * debian/control: Extend previous fix from build-depends to libminc-dev - depends; i.e. use OpenMPI, except for certain architectures that it - doesn't support; in the latter case, use LAM. - - -- Steve M. Robbins <[email protected]> Thu, 30 Oct 2008 01:10:55 -0500 - -minc (2.0.16-2) unstable; urgency=low - - * debian/control: Use OpenMPI, except for certain architectures that it - doesn't support; in the latter case, use LAM. - - -- Steve M. Robbins <[email protected]> Mon, 27 Oct 2008 01:11:21 -0500 - -minc (2.0.16-1) unstable; urgency=low - - * New upstream release. - - debian/patches/02_mincedit-no-escape-chars: Remove. Applied upstream. - - * debian/control: Switch dependencies from libhdf5-serial-dev to - libhdf5-openmpi-dev. - * debian/rules: Add CFLAGS=-I/usr/include/mpi to configure step so that - mpi.h is found. - - * debian/control: Remove tetex-bin from build-depends (was alternative - to texlive-latex-base). Update Standards-Version to 3.8.0 (no - changes). - - * debian/patches/04_manpages.diff: Fix errors in manpages, mainly - removal of trailing TAB characters. - - * debian/rules: Adhere to parallel keyword in DEB_BUILD_OPTIONS. - - -- Steve M. Robbins <[email protected]> Sat, 11 Oct 2008 23:55:42 -0500 - -minc (2.0.15-3) unstable; urgency=low - - [ Charles Plessy ] - * debian/copyright: added upstream contact information. - - [ Steve M. Robbins ] - * debian/patches/02_mincedit-no-escape-chars.diff: New. Patch mincedit - to remove extraneous \n strings. Closes: 486048. - * debian/control: Replace depends on netcdfg-dev by libnetcdf-dev. - - -- Steve M. Robbins <[email protected]> Thu, 19 Jun 2008 07:40:18 -0500 - -minc (2.0.15-2) unstable; urgency=low - - [ David Paleino ] - * debian/rules: - - conditionally add -mieee on Alpha (Closes: #368263) - - [ Steve M. Robbins ] - * debian/rules: Do not run the tests, since they are broken in many - ways; e.g. int functions without a return statement, checking - floating-point values without a tolerance, and some that require a - list of files on the command line but are given none. - Closes: #475808. - - -- Steve M. Robbins <[email protected]> Thu, 05 Jun 2008 09:24:59 -0500 - -minc (2.0.15-1) unstable; urgency=low - - [ Charles Plessy ] - * Changed the doc-base section according to the new policy. - - [ David Paleino ] - * New upstream release - * debian/patches/: - - 01_mincedit-sensible-viewer.diff updated - - 02_testdir-runtests.diff removed, it has been merged upstream - - -- Steve M. Robbins <[email protected]> Sat, 31 May 2008 05:53:26 -0500 - -minc (2.0.14-2) unstable; urgency=low - - * rules: Don't install byte_swap or extract; can use "dd" instead of - these tools. Closes: #459834. - - * control: Package minc-tools depends on libgetopt-tabular-perl. - * rules: Don't install Tabular.pm. - * Getopt-Tabular-0.3/Tabular.pm: Remove. - * patches/04_progs-use-lib.diff: Remove. - * copyright: Remove Getopt-Tabular license text. - - -- Steve M. Robbins <[email protected]> Fri, 11 Jan 2008 00:30:23 -0600 - -minc (2.0.14-1) unstable; urgency=low - - * New upstream version. Closes: #450922. - - * control: Set Maintainer to debian-med-packaging. - Add build-depends for libhdf5-serial-dev, texlive-latex-base. - Rename package libminc0 --> libminc2-1. - Rename package libminc0-dev --> libminc-dev. - Package libminc-dev depends on libhdf5-serial-dev. - Package minc-tools depends on imagemagick. - - * rules: Configure with --enable-minc2 and --enable-acr-nema. - - * Getopt-Tabular-0.3/Tabular.pm: New. Perl module required - for mincpik and xfmflip. Closes: #457074. - - * patches/02_testdir-runtests.diff: New. Fix test scripts. - - * patches/03_mincview.diff: New. Use 'display' from ImageMagick rather - than 'xv' to view images. Closes: #457072. - - * patches/04_progs-use-lib.diff: New. Add "use lib" declaration to find - the private Getopt::Tabular. - - -- Steve M. Robbins <[email protected]> Sun, 06 Jan 2008 20:40:29 -0600 - -minc (1.5-2) NEVER UPLOADED; urgency=low - - * Rewrite build system using cdbs. - - patches/01_mincedit-sensible-viewer.diff: New. Obtained from - existing Debian diff. - - * control: Build-depend on texlive-latex-base | tetex-bin, rather - than just tetex-bin. Update to Standards-Version 3.7.3 (no change - required). Use ${binary:Version} rather than ${Source-Version} - for libminc0-dev dependency on libminc0. Add Homepage and Vcs-Svn - header fields. - - -- Steve M. Robbins <[email protected]> Sat, 29 Dec 2007 15:10:53 -0600 - -minc (1.5-1) unstable; urgency=low - - * New upstream. - - -- Steve M. Robbins <[email protected]> Mon, 13 Nov 2006 23:26:13 -0600 - -minc (1.4.1-1) unstable; urgency=low - - * New upstream. - - -- Steve M. Robbins <[email protected]> Sat, 11 Nov 2006 22:14:54 -0600 - -minc (1.4-4) unstable; urgency=low - - * testdir/create_grid_xfm.c: initialize minc_input_options properly. - Closes: #352183. - - -- Steve M. Robbins <[email protected]> Sat, 18 Feb 2006 17:33:37 -0500 - -minc (1.4-3) unstable; urgency=low - - * Build-depend on csh. Closes: #351826. - - -- Steve M. Robbins <[email protected]> Tue, 7 Feb 2006 20:02:56 -0500 - -minc (1.4-2) unstable; urgency=low - - * Rebuild to pick up new netcdf library, which changed due to - C++ ABI transition (#346312). - - -- Steve M. Robbins <[email protected]> Sun, 5 Feb 2006 13:45:22 -0500 - -minc (1.4-1) unstable; urgency=low - - * New upstream version. - - * Omit dependency on essential package debianutils (for sensible-editor). - Closes: #316425. - - -- Steve M. Robbins <[email protected]> Sun, 3 Jul 2005 20:31:25 -0400 - -minc (1.3-3) unstable; urgency=low - - * progs/mincedit/mincedit: use "sensible-editor" rather than "emacs". - Closes: #292194. - - -- Steve M. Robbins <[email protected]> Thu, 27 Jan 2005 22:21:22 -0500 - -minc (1.3-2) unstable; urgency=low - - * debian/rules: package minc-tools depends on libtext-format-perl - Closes: #278840. - - -- Steve M. Robbins <[email protected]> Sun, 28 Nov 2004 14:33:06 -0500 - -minc (1.3-1) unstable; urgency=low - - * New upstream version. - Re-ran all auto*-tools machinery, as upstream used fairly old versions. - - * configure.in: Don't use AC_CONFIG_LINKS to generate link - volume_io/Include/volume_io to directory volume_io/Include as - autoconf 2.59 chokes on it. Use shell commands instead. - - * volume_io/Include/internal_volume_io.h: Do not include "config.h". - * volume_io/Prog_utils/files.c: Do include "config.h". - * volume_io/Prog_utils/time.c: Restore call to sysconf( _SC_CLK_TCK ), - wrapped in #if HAVE_SYSCONF. - - -- Steve M. Robbins <[email protected]> Sun, 28 Nov 2004 14:22:03 -0500 - -minc (1.2-1) unstable; urgency=low - - * New upstream version. - - * debian/control: minc-tools depend on netcdf-bin (for ncdump). - - -- Steve M. Robbins <[email protected]> Sat, 20 Dec 2003 11:22:09 -0500 - -minc (1.1-1) unstable; urgency=low - - * New upstream. - - build shared lib package - - rename devel package to libminc0-dev - - -- Steve M. Robbins <[email protected]> Sat, 25 Jan 2003 18:25:04 -0500 - -minc (1.0-2) unstable; urgency=low - - * libminc-dev: Depend on netcdfg-dev. - - * minc-tools: Use "csh|c-shell" in dependency line, remove dependency - on "awk" on advice from lintian. - - * Update from upstream CVS. - - -- Steve M. Robbins <[email protected]> Wed, 11 Dec 2002 12:27:36 -0500 - -minc (1.0-1) unstable; urgency=low - - * Initial Debian package. Closes: #153629. - - * Patches from upstream CVS: - - libsrc/ParseArgv.h: declare as "extern C" - - progs/mincstats/mincstats.c: fix segfault - - -- Steve M. Robbins <[email protected]> Mon, 29 Jul 2002 16:06:56 -0400 - Copied: trunk/packages/minc/tags/2.2.00-1/debian/changelog (from rev 12407, trunk/packages/minc/trunk/debian/changelog) =================================================================== --- trunk/packages/minc/tags/2.2.00-1/debian/changelog (rev 0) +++ trunk/packages/minc/tags/2.2.00-1/debian/changelog 2012-10-14 05:10:13 UTC (rev 12408) @@ -0,0 +1,348 @@ +minc (2.2.00-1) unstable; urgency=low + + * New upstream. + * patches/hdfv2-fixes.patch: Remove. Applied upstream. + * patches/makefile.patch: New. Fix build failure. + + * rules: + * control: SOVERSION bump to 3; new package name libminc2-3. + + -- Steve M. Robbins <[email protected]> Sat, 13 Oct 2012 23:09:25 -0500 + +minc (2.1.10-1) unstable; urgency=low + + * New upstream. + + * patches/03_mincview.diff: Remove. Script mincview rewritten to use + Imagemagick + + * patches/decompress-whole-file.diff: + * patches/read_file_names-refactor.patch: Remove. Applied upstream. + * rules: Remove use of dh_autoreconf. + + * patches/hdfv2-fixes.patch: New. Ensure using HDF5 v2 API. + + * control: Remove dependency and build-dependency on csh. + + -- Steve M. Robbins <[email protected]> Sun, 26 Feb 2012 01:37:47 -0600 + +minc (2.1.00-5) unstable; urgency=low + + * patches/mincaverage-pathmax.patch: Remove. + * patches/read_file_names-refactor.patch: New. Refactored duplicated + PATH_MAX-using code into library. Need to run autoreconf because + Makefile.am changed. + + * rules: Fix errors and really disable tests on sparc. + + -- Steve M. Robbins <[email protected]> Mon, 20 Feb 2012 15:00:32 -0600 + +minc (2.1.00-4) unstable; urgency=low + + * source/format: Set to 3.0 (quilt), so that patches are applied. + + * patches/mincaverage-pathmax.patch: New. Work around missing PATH_MAX + definition; fixes FTBFS on hurd. + + * rules: Tests are buggy, but do work on most architectures. Disable on + sparc. + + -- Steve M. Robbins <[email protected]> Sun, 19 Feb 2012 21:58:51 -0600 + +minc (2.1.00-3) unstable; urgency=low + + * control: Switch to (serial) libhdf5-dev, to avoid conflict with serial + netcdf. Closes: #658307. + + * control: + * rules: Switch from cdbs to debhelper's dh (compat level 9). + + -- Steve M. Robbins <[email protected]> Sun, 19 Feb 2012 08:53:04 -0600 + +minc (2.1.00-2) unstable; urgency=low + + * patches/decompress-whole-file.diff: New. Always decompress entire + file to support compressed MINC2 files. Closes: #585676. + + -- Steve M. Robbins <[email protected]> Sun, 18 Dec 2011 20:47:03 -0600 + +minc (2.1.00-1) unstable; urgency=low + + * New upstream. + + -- Steve M. Robbins <[email protected]> Tue, 17 Aug 2010 22:26:16 -0500 + +minc (2.0.18+cvs20100518-1) unstable; urgency=low + + * Pull upstream CVS, contains fixes for netcdf 4. Closes: #577060, + #581296. + + * control: replace libhdf5-*-dev (differing by architecture) by + libhdf5-mpi-dev. + + -- Steve M. Robbins <[email protected]> Tue, 18 May 2010 22:53:30 -0500 + +minc (2.0.18-1) unstable; urgency=low + + * New upstream version. + + -- Steve M. Robbins <[email protected]> Mon, 20 Jul 2009 05:24:57 -0500 + +minc (2.0.17-1) unstable; urgency=low + + * New upstream version. + + * patches/04_manpages.diff: + * debian/patches/05_parseargv.diff: Remove; applied upstream. + + -- Steve M. Robbins <[email protected]> Tue, 20 Jan 2009 19:37:41 -0600 + +minc (2.0.16-4) unstable; urgency=low + + * debian/patches/05_parseargv.diff: New. Patch from upstream to fix arg + parsing on 64bits. Closes: #510629. This was also the root cause of + mincheader and mincdiff failing. Closes: #506276. + + * debian/control: Add ${misc:Depends}, since we use debhelper. + + * debian/rules: Do not install test code acr_test, dicom_test. + + -- Steve M. Robbins <[email protected]> Sat, 03 Jan 2009 16:29:06 -0600 + +minc (2.0.16-3) unstable; urgency=low + + * debian/control: Extend previous fix from build-depends to libminc-dev + depends; i.e. use OpenMPI, except for certain architectures that it + doesn't support; in the latter case, use LAM. + + -- Steve M. Robbins <[email protected]> Thu, 30 Oct 2008 01:10:55 -0500 + +minc (2.0.16-2) unstable; urgency=low + + * debian/control: Use OpenMPI, except for certain architectures that it + doesn't support; in the latter case, use LAM. + + -- Steve M. Robbins <[email protected]> Mon, 27 Oct 2008 01:11:21 -0500 + +minc (2.0.16-1) unstable; urgency=low + + * New upstream release. + - debian/patches/02_mincedit-no-escape-chars: Remove. Applied upstream. + + * debian/control: Switch dependencies from libhdf5-serial-dev to + libhdf5-openmpi-dev. + * debian/rules: Add CFLAGS=-I/usr/include/mpi to configure step so that + mpi.h is found. + + * debian/control: Remove tetex-bin from build-depends (was alternative + to texlive-latex-base). Update Standards-Version to 3.8.0 (no + changes). + + * debian/patches/04_manpages.diff: Fix errors in manpages, mainly + removal of trailing TAB characters. + + * debian/rules: Adhere to parallel keyword in DEB_BUILD_OPTIONS. + + -- Steve M. Robbins <[email protected]> Sat, 11 Oct 2008 23:55:42 -0500 + +minc (2.0.15-3) unstable; urgency=low + + [ Charles Plessy ] + * debian/copyright: added upstream contact information. + + [ Steve M. Robbins ] + * debian/patches/02_mincedit-no-escape-chars.diff: New. Patch mincedit + to remove extraneous \n strings. Closes: 486048. + * debian/control: Replace depends on netcdfg-dev by libnetcdf-dev. + + -- Steve M. Robbins <[email protected]> Thu, 19 Jun 2008 07:40:18 -0500 + +minc (2.0.15-2) unstable; urgency=low + + [ David Paleino ] + * debian/rules: + - conditionally add -mieee on Alpha (Closes: #368263) + + [ Steve M. Robbins ] + * debian/rules: Do not run the tests, since they are broken in many + ways; e.g. int functions without a return statement, checking + floating-point values without a tolerance, and some that require a + list of files on the command line but are given none. + Closes: #475808. + + -- Steve M. Robbins <[email protected]> Thu, 05 Jun 2008 09:24:59 -0500 + +minc (2.0.15-1) unstable; urgency=low + + [ Charles Plessy ] + * Changed the doc-base section according to the new policy. + + [ David Paleino ] + * New upstream release + * debian/patches/: + - 01_mincedit-sensible-viewer.diff updated + - 02_testdir-runtests.diff removed, it has been merged upstream + + -- Steve M. Robbins <[email protected]> Sat, 31 May 2008 05:53:26 -0500 + +minc (2.0.14-2) unstable; urgency=low + + * rules: Don't install byte_swap or extract; can use "dd" instead of + these tools. Closes: #459834. + + * control: Package minc-tools depends on libgetopt-tabular-perl. + * rules: Don't install Tabular.pm. + * Getopt-Tabular-0.3/Tabular.pm: Remove. + * patches/04_progs-use-lib.diff: Remove. + * copyright: Remove Getopt-Tabular license text. + + -- Steve M. Robbins <[email protected]> Fri, 11 Jan 2008 00:30:23 -0600 + +minc (2.0.14-1) unstable; urgency=low + + * New upstream version. Closes: #450922. + + * control: Set Maintainer to debian-med-packaging. + Add build-depends for libhdf5-serial-dev, texlive-latex-base. + Rename package libminc0 --> libminc2-1. + Rename package libminc0-dev --> libminc-dev. + Package libminc-dev depends on libhdf5-serial-dev. + Package minc-tools depends on imagemagick. + + * rules: Configure with --enable-minc2 and --enable-acr-nema. + + * Getopt-Tabular-0.3/Tabular.pm: New. Perl module required + for mincpik and xfmflip. Closes: #457074. + + * patches/02_testdir-runtests.diff: New. Fix test scripts. + + * patches/03_mincview.diff: New. Use 'display' from ImageMagick rather + than 'xv' to view images. Closes: #457072. + + * patches/04_progs-use-lib.diff: New. Add "use lib" declaration to find + the private Getopt::Tabular. + + -- Steve M. Robbins <[email protected]> Sun, 06 Jan 2008 20:40:29 -0600 + +minc (1.5-2) NEVER UPLOADED; urgency=low + + * Rewrite build system using cdbs. + - patches/01_mincedit-sensible-viewer.diff: New. Obtained from + existing Debian diff. + + * control: Build-depend on texlive-latex-base | tetex-bin, rather + than just tetex-bin. Update to Standards-Version 3.7.3 (no change + required). Use ${binary:Version} rather than ${Source-Version} + for libminc0-dev dependency on libminc0. Add Homepage and Vcs-Svn + header fields. + + -- Steve M. Robbins <[email protected]> Sat, 29 Dec 2007 15:10:53 -0600 + +minc (1.5-1) unstable; urgency=low + + * New upstream. + + -- Steve M. Robbins <[email protected]> Mon, 13 Nov 2006 23:26:13 -0600 + +minc (1.4.1-1) unstable; urgency=low + + * New upstream. + + -- Steve M. Robbins <[email protected]> Sat, 11 Nov 2006 22:14:54 -0600 + +minc (1.4-4) unstable; urgency=low + + * testdir/create_grid_xfm.c: initialize minc_input_options properly. + Closes: #352183. + + -- Steve M. Robbins <[email protected]> Sat, 18 Feb 2006 17:33:37 -0500 + +minc (1.4-3) unstable; urgency=low + + * Build-depend on csh. Closes: #351826. + + -- Steve M. Robbins <[email protected]> Tue, 7 Feb 2006 20:02:56 -0500 + +minc (1.4-2) unstable; urgency=low + + * Rebuild to pick up new netcdf library, which changed due to + C++ ABI transition (#346312). + + -- Steve M. Robbins <[email protected]> Sun, 5 Feb 2006 13:45:22 -0500 + +minc (1.4-1) unstable; urgency=low + + * New upstream version. + + * Omit dependency on essential package debianutils (for sensible-editor). + Closes: #316425. + + -- Steve M. Robbins <[email protected]> Sun, 3 Jul 2005 20:31:25 -0400 + +minc (1.3-3) unstable; urgency=low + + * progs/mincedit/mincedit: use "sensible-editor" rather than "emacs". + Closes: #292194. + + -- Steve M. Robbins <[email protected]> Thu, 27 Jan 2005 22:21:22 -0500 + +minc (1.3-2) unstable; urgency=low + + * debian/rules: package minc-tools depends on libtext-format-perl + Closes: #278840. + + -- Steve M. Robbins <[email protected]> Sun, 28 Nov 2004 14:33:06 -0500 + +minc (1.3-1) unstable; urgency=low + + * New upstream version. + Re-ran all auto*-tools machinery, as upstream used fairly old versions. + + * configure.in: Don't use AC_CONFIG_LINKS to generate link + volume_io/Include/volume_io to directory volume_io/Include as + autoconf 2.59 chokes on it. Use shell commands instead. + + * volume_io/Include/internal_volume_io.h: Do not include "config.h". + * volume_io/Prog_utils/files.c: Do include "config.h". + * volume_io/Prog_utils/time.c: Restore call to sysconf( _SC_CLK_TCK ), + wrapped in #if HAVE_SYSCONF. + + -- Steve M. Robbins <[email protected]> Sun, 28 Nov 2004 14:22:03 -0500 + +minc (1.2-1) unstable; urgency=low + + * New upstream version. + + * debian/control: minc-tools depend on netcdf-bin (for ncdump). + + -- Steve M. Robbins <[email protected]> Sat, 20 Dec 2003 11:22:09 -0500 + +minc (1.1-1) unstable; urgency=low + + * New upstream. + - build shared lib package + - rename devel package to libminc0-dev + + -- Steve M. Robbins <[email protected]> Sat, 25 Jan 2003 18:25:04 -0500 + +minc (1.0-2) unstable; urgency=low + + * libminc-dev: Depend on netcdfg-dev. + + * minc-tools: Use "csh|c-shell" in dependency line, remove dependency + on "awk" on advice from lintian. + + * Update from upstream CVS. + + -- Steve M. Robbins <[email protected]> Wed, 11 Dec 2002 12:27:36 -0500 + +minc (1.0-1) unstable; urgency=low + + * Initial Debian package. Closes: #153629. + + * Patches from upstream CVS: + - libsrc/ParseArgv.h: declare as "extern C" + - progs/mincstats/mincstats.c: fix segfault + + -- Steve M. Robbins <[email protected]> Mon, 29 Jul 2002 16:06:56 -0400 + Deleted: trunk/packages/minc/tags/2.2.00-1/debian/control =================================================================== --- trunk/packages/minc/trunk/debian/control 2012-10-13 09:02:00 UTC (rev 12403) +++ trunk/packages/minc/tags/2.2.00-1/debian/control 2012-10-14 05:10:13 UTC (rev 12408) @@ -1,70 +0,0 @@ -Source: minc -Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage -Section: science -Priority: optional -Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Steve M. Robbins <[email protected]> -Build-Depends: debhelper (>= 9), autotools-dev, dh-autoreconf, - libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev -Standards-Version: 3.9.2 -Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/minc/trunk/ -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/minc/trunk/ - -Package: minc-tools -Architecture: any -Depends: ${shlibs:Depends}, ${misc:Depends}, netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick -Description: MNI medical image format tools - This package contains tools to manipulate MINC files. - . - The Minc file format is a highly flexible medical image file format - built on top of the NetCDF generalized data format. The format is - simple, self-describing, extensible, portable and N-dimensional, with - programming interfaces for both low-level data access and high-level - volume manipulation. On top of the libraries is a suite of generic - image-file manipulation tools. The format, libraries and tools are - designed for use in a medical-imaging research environment: they are - simple and powerful and make no attempt to provide a pretty interface - to users. - -Package: libminc2-1 -Section: libs -Architecture: any -Multi-Arch: same -Pre-Depends: ${misc:Pre-Depends} -Depends: ${shlibs:Depends}, ${misc:Depends} -Description: MNI medical image format library - This package contains the libraries libminc2 and libvolume_io2. - . - The Minc file format is a highly flexible medical image file format. - Minc version 1 is built on top of the NetCDF generalized data format. - Minc version 2 is built on top of the HDF data format. This library - handles both formats. In each case the format is - simple, self-describing, extensible, portable and N-dimensional, with - programming interfaces for both low-level data access and high-level - volume manipulation. On top of the libraries is a suite of generic - image-file manipulation tools. The format, libraries and tools are - designed for use in a medical-imaging research environment : they are - simple and powerful and make no attempt to provide a pretty interface - to users. - -Package: libminc-dev -Conflicts: libminc0-dev -Replaces: libminc0-dev -Section: libdevel -Architecture: any -Depends: ${misc:Depends}, libminc2-1 (= ${binary:Version}), libnetcdf-dev, libhdf5-dev -Description: MNI medical image format development environment - This package contains the library and headers for libminc2 and - libvolume_io2. - . - The Minc file format is a highly flexible medical image file format. - Minc version 1 is built on top of the NetCDF generalized data format. - Minc version 2 is built on top of the HDF data format. This library - handles both formats. In each case the format is - simple, self-describing, extensible, portable and N-dimensional, with - programming interfaces for both low-level data access and high-level - volume manipulation. On top of the libraries is a suite of generic - image-file manipulation tools. The format, libraries and tools are - designed for use in a medical-imaging research environment : they are - simple and powerful and make no attempt to provide a pretty interface - to users. Copied: trunk/packages/minc/tags/2.2.00-1/debian/control (from rev 12404, trunk/packages/minc/trunk/debian/control) =================================================================== --- trunk/packages/minc/tags/2.2.00-1/debian/control (rev 0) +++ trunk/packages/minc/tags/2.2.00-1/debian/control 2012-10-14 05:10:13 UTC (rev 12408) @@ -0,0 +1,70 @@ +Source: minc +Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Steve M. Robbins <[email protected]> +Build-Depends: debhelper (>= 9), autotools-dev, dh-autoreconf, + libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev +Standards-Version: 3.9.2 +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/minc/trunk/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/minc/trunk/ + +Package: minc-tools +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends}, netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick +Description: MNI medical image format tools + This package contains tools to manipulate MINC files. + . + The Minc file format is a highly flexible medical image file format + built on top of the NetCDF generalized data format. The format is + simple, self-describing, extensible, portable and N-dimensional, with + programming interfaces for both low-level data access and high-level + volume manipulation. On top of the libraries is a suite of generic + image-file manipulation tools. The format, libraries and tools are + designed for use in a medical-imaging research environment: they are + simple and powerful and make no attempt to provide a pretty interface + to users. + +Package: libminc2-3 +Section: libs +Architecture: any +Multi-Arch: same +Pre-Depends: ${misc:Pre-Depends} +Depends: ${shlibs:Depends}, ${misc:Depends} +Description: MNI medical image format library + This package contains the libraries libminc2 and libvolume_io2. + . + The Minc file format is a highly flexible medical image file format. + Minc version 1 is built on top of the NetCDF generalized data format. + Minc version 2 is built on top of the HDF data format. This library + handles both formats. In each case the format is + simple, self-describing, extensible, portable and N-dimensional, with + programming interfaces for both low-level data access and high-level + volume manipulation. On top of the libraries is a suite of generic + image-file manipulation tools. The format, libraries and tools are + designed for use in a medical-imaging research environment : they are + simple and powerful and make no attempt to provide a pretty interface + to users. + +Package: libminc-dev +Conflicts: libminc0-dev +Replaces: libminc0-dev +Section: libdevel +Architecture: any +Depends: ${misc:Depends}, libminc2-3 (= ${binary:Version}), libnetcdf-dev, libhdf5-dev +Description: MNI medical image format development environment + This package contains the library and headers for libminc2 and + libvolume_io2. + . + The Minc file format is a highly flexible medical image file format. + Minc version 1 is built on top of the NetCDF generalized data format. + Minc version 2 is built on top of the HDF data format. This library + handles both formats. In each case the format is + simple, self-describing, extensible, portable and N-dimensional, with + programming interfaces for both low-level data access and high-level + volume manipulation. On top of the libraries is a suite of generic + image-file manipulation tools. The format, libraries and tools are + designed for use in a medical-imaging research environment : they are + simple and powerful and make no attempt to provide a pretty interface + to users. Copied: trunk/packages/minc/tags/2.2.00-1/debian/patches/makefile.patch (from rev 12404, trunk/packages/minc/trunk/debian/patches/makefile.patch) =================================================================== --- trunk/packages/minc/tags/2.2.00-1/debian/patches/makefile.patch (rev 0) +++ trunk/packages/minc/tags/2.2.00-1/debian/patches/makefile.patch 2012-10-14 05:10:13 UTC (rev 12408) @@ -0,0 +1,88 @@ +--- minc-2.2.00.orig/Makefile.am ++++ minc-2.2.00/Makefile.am +@@ -274,30 +274,30 @@ + m4/smr_WITH_BUILD_PATH.m4 + + ezMINC_files = \ +- ezminc/examples/volume_msq_dist.cpp +- ezminc/examples/CMakeLists.txt +- ezminc/examples/fuzzy_volume_similarity.cpp +- ezminc/examples/trilinear_resample.cpp +- ezminc/examples/volume_avg.cpp +- ezminc/examples/volume_gtc_similarity.cpp +- ezminc/examples/volume_similarity.cpp +- ezminc/minc_1_simple_rw.cpp +- ezminc/minc_1_simple_rw.h +- ezminc/minc_io_4d_volume.h +- ezminc/minc_io_fixed_vector.h +- ezminc/minc_io_simple_volume.h +- ezminc/tests/minc_rw_test2.cpp +- ezminc/tests/minc_rw_test_4d.cpp +- ezminc/tests/minc_rw_test_simple.cpp +- ezminc/tests/CMakeLists.txt +- ezminc/tests/ezminc_rw_test.cpp +- ezminc/tests/ezminc_stats.cpp +- ezminc/minc_1_simple.h +- ezminc/CMakeLists.txt +- ezminc/minc_1_rw.cpp +- ezminc/minc_1_rw.h ++ ezminc/examples/volume_msq_dist.cpp \ ++ ezminc/examples/CMakeLists.txt \ ++ ezminc/examples/fuzzy_volume_similarity.cpp \ ++ ezminc/examples/trilinear_resample.cpp \ ++ ezminc/examples/volume_avg.cpp \ ++ ezminc/examples/volume_gtc_similarity.cpp \ ++ ezminc/examples/volume_similarity.cpp \ ++ ezminc/minc_1_simple_rw.cpp \ ++ ezminc/minc_1_simple_rw.h \ ++ ezminc/minc_io_4d_volume.h \ ++ ezminc/minc_io_fixed_vector.h \ ++ ezminc/minc_io_simple_volume.h \ ++ ezminc/tests/minc_rw_test2.cpp \ ++ ezminc/tests/minc_rw_test_4d.cpp \ ++ ezminc/tests/minc_rw_test_simple.cpp \ ++ ezminc/tests/CMakeLists.txt \ ++ ezminc/tests/ezminc_rw_test.cpp \ ++ ezminc/tests/ezminc_stats.cpp \ ++ ezminc/minc_1_simple.h \ ++ ezminc/CMakeLists.txt \ ++ ezminc/minc_1_rw.cpp \ ++ ezminc/minc_1_rw.h \ + ezminc/minc_io_exceptions.h +- ++ + voxeltoworld_SOURCES = progs/coordinates/voxeltoworld.c + + worldtovoxel_SOURCES = progs/coordinates/worldtovoxel.c +--- minc-2.2.00.orig/Makefile.in ++++ minc-2.2.00/Makefile.in +@@ -3460,28 +3460,7 @@ + $(POD2MAN) --section=1 $< > $@ + progs/mincpik/mincpik.man1: progs/mincpik/mincpik + $(POD2MAN) --section=1 $< > $@ +- ezminc/examples/CMakeLists.txt +- ezminc/examples/fuzzy_volume_similarity.cpp +- ezminc/examples/trilinear_resample.cpp +- ezminc/examples/volume_avg.cpp +- ezminc/examples/volume_gtc_similarity.cpp +- ezminc/examples/volume_similarity.cpp +- ezminc/minc_1_simple_rw.cpp +- ezminc/minc_1_simple_rw.h +- ezminc/minc_io_4d_volume.h +- ezminc/minc_io_fixed_vector.h +- ezminc/minc_io_simple_volume.h +- ezminc/tests/minc_rw_test2.cpp +- ezminc/tests/minc_rw_test_4d.cpp +- ezminc/tests/minc_rw_test_simple.cpp +- ezminc/tests/CMakeLists.txt +- ezminc/tests/ezminc_rw_test.cpp +- ezminc/tests/ezminc_stats.cpp +- ezminc/minc_1_simple.h +- ezminc/CMakeLists.txt +- ezminc/minc_1_rw.cpp +- ezminc/minc_1_rw.h +- ezminc/minc_io_exceptions.h ++ + # Tell versions [3.59,3.63) of GNU make to not export all variables. + # Otherwise a system limit (for SysV at least) may be exceeded. + .NOEXPORT: Deleted: trunk/packages/minc/tags/2.2.00-1/debian/patches/series =================================================================== --- trunk/packages/minc/trunk/debian/patches/series 2012-10-13 09:02:00 UTC (rev 12403) +++ trunk/packages/minc/tags/2.2.00-1/debian/patches/series 2012-10-14 05:10:13 UTC (rev 12408) @@ -1 +0,0 @@ -01_mincedit-sensible-viewer.diff Copied: trunk/packages/minc/tags/2.2.00-1/debian/patches/series (from rev 12404, trunk/packages/minc/trunk/debian/patches/series) =================================================================== --- trunk/packages/minc/tags/2.2.00-1/debian/patches/series (rev 0) +++ trunk/packages/minc/tags/2.2.00-1/debian/patches/series 2012-10-14 05:10:13 UTC (rev 12408) @@ -0,0 +1,2 @@ +makefile.patch +01_mincedit-sensible-viewer.diff Deleted: trunk/packages/minc/tags/2.2.00-1/debian/rules =================================================================== --- trunk/packages/minc/trunk/debian/rules 2012-10-13 09:02:00 UTC (rev 12403) +++ trunk/packages/minc/tags/2.2.00-1/debian/rules 2012-10-14 05:10:13 UTC (rev 12408) @@ -1,46 +0,0 @@ -#! /usr/bin/make -f - -%: - dh $@ --parallel --with autotools_dev - - -ARCH := $(shell dpkg-architecture -qDEB_BUILD_ARCH) -# Tests are buggy; disable test on sparc -ifeq ($(ARCH),sparc) - DEB_BUILD_OPTIONS += nocheck -endif - - - -DEB_CONFIGURE_EXTRA_FLAGS = --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="$(CFLAGS)" - - -override_dh_auto_configure: - dh_auto_configure -- $(DEB_CONFIGURE_EXTRA_FLAGS) - -ps_docs = doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps - -doc/prog_ref.ps doc/prog_guide.ps: - $(MAKE) -C doc docs - -volume_io/Documentation/volume_io.ps: - $(MAKE) -C volume_io/Documentation docs - -override_dh_install: $(ps_docs) - # minc-tools - rm -f debian/tmp/usr/bin/byte_swap - rm -f debian/tmp/usr/bin/extract - rm -f debian/tmp/usr/bin/acr_test - rm -f debian/tmp/usr/bin/dicom_test - dh_install -pminc-tools --autodest debian/tmp/usr/bin - dh_install -pminc-tools --autodest debian/tmp/usr/share/man - dh_link -pminc-tools \ - /usr/share/man/man1/voxeltoworld.1 \ - /usr/share/man/man1/worldtovoxel.1 - # libminc2-1 - dh_install -plibminc2-1 --autodest debian/tmp/usr/lib/*/lib*.so.* - # libminc-dev - dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.so - dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.a - dh_install -plibminc-dev --autodest debian/tmp/usr/include - dh_installdocs -plibminc-dev $(ps_docs) debian/index.html Copied: trunk/packages/minc/tags/2.2.00-1/debian/rules (from rev 12407, trunk/packages/minc/trunk/debian/rules) =================================================================== --- trunk/packages/minc/tags/2.2.00-1/debian/rules (rev 0) +++ trunk/packages/minc/tags/2.2.00-1/debian/rules 2012-10-14 05:10:13 UTC (rev 12408) @@ -0,0 +1,46 @@ +#! /usr/bin/make -f + +%: + dh $@ --parallel --with autotools_dev + + +ARCH := $(shell dpkg-architecture -qDEB_BUILD_ARCH) +# Tests are buggy; disable test on sparc +ifeq ($(ARCH),sparc) + DEB_BUILD_OPTIONS += nocheck +endif + + + +DEB_CONFIGURE_EXTRA_FLAGS = --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="$(CFLAGS)" + + +override_dh_auto_configure: + dh_auto_configure -- $(DEB_CONFIGURE_EXTRA_FLAGS) + +ps_docs = doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps + +doc/prog_ref.ps doc/prog_guide.ps: + $(MAKE) -C doc docs + +volume_io/Documentation/volume_io.ps: + $(MAKE) -C volume_io/Documentation docs + +override_dh_install: $(ps_docs) + # minc-tools + rm -f debian/tmp/usr/bin/byte_swap + rm -f debian/tmp/usr/bin/extract + rm -f debian/tmp/usr/bin/acr_test + rm -f debian/tmp/usr/bin/dicom_test + dh_install -pminc-tools --autodest debian/tmp/usr/bin + dh_install -pminc-tools --autodest debian/tmp/usr/share/man + dh_link -pminc-tools \ + /usr/share/man/man1/voxeltoworld.1 \ + /usr/share/man/man1/worldtovoxel.1 + # libminc2-3 + dh_install -plibminc2-3 --autodest debian/tmp/usr/lib/*/lib*.so.* + # libminc-dev + dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.so + dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.a + dh_install -plibminc-dev --autodest debian/tmp/usr/include + dh_installdocs -plibminc-dev $(ps_docs) debian/index.html _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
