Author: osallou-guest Date: 2012-12-15 08:27:24 +0000 (Sat, 15 Dec 2012) New Revision: 12623
Modified: trunk/packages/gmod/gbrowse/trunk/debian/changelog trunk/packages/gmod/gbrowse/trunk/debian/control trunk/packages/gmod/gbrowse/trunk/debian/patches/debian-packaging-patch trunk/packages/gmod/gbrowse/trunk/debian/patches/manpages.patch trunk/packages/gmod/gbrowse/trunk/debian/patches/skip_check_installed_test.patch Log: New upstream release control and patches updates (offset updates) Modified: trunk/packages/gmod/gbrowse/trunk/debian/changelog =================================================================== --- trunk/packages/gmod/gbrowse/trunk/debian/changelog 2012-12-14 18:15:11 UTC (rev 12622) +++ trunk/packages/gmod/gbrowse/trunk/debian/changelog 2012-12-15 08:27:24 UTC (rev 12623) @@ -1,3 +1,12 @@ +gbrowse (2.54-1) UNRELEASED; urgency=low + + * New upstream release + * debian/control: increase min bio-graphics version + + Waiting for libbio-graphics-perl update + + -- Olivier Sallou <[email protected]> Sat, 15 Dec 2012 09:11:03 +0100 + gbrowse (2.51+dfsg-1) unstable; urgency=low [ Olivier Sallou ] Modified: trunk/packages/gmod/gbrowse/trunk/debian/control =================================================================== --- trunk/packages/gmod/gbrowse/trunk/debian/control 2012-12-14 18:15:11 UTC (rev 12622) +++ trunk/packages/gmod/gbrowse/trunk/debian/control 2012-12-15 08:27:24 UTC (rev 12623) @@ -2,7 +2,7 @@ Section: science Priority: optional Build-Depends: bioperl (>= 1.6.901), debhelper (>= 8), - libbio-graphics-perl (>= 2.28), libcapture-tiny-perl, libcgi-session-perl (>= 4.02), + libbio-graphics-perl (>= 2.31), libcapture-tiny-perl, libcgi-session-perl (>= 4.02), libgd-gd2-perl (>= 2.07) | libgd-gd2-noxpm-perl (>= 2.07), libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, perl, perl (>= 5.10.0) | libextutils-cbuilder-perl, sqlite3,libdbd-sqlite3-perl, libterm-readkey-perl, libjs-prototype (>=1.7), libjs-scriptaculous (>= 1.9), @@ -19,7 +19,7 @@ Package: gbrowse Architecture: all Depends: ${misc:Depends}, ${perl:Depends}, - bioperl (>= 1.6.901), libbio-graphics-perl (>= 2.28), + bioperl (>= 1.6.901), libbio-graphics-perl (>= 2.31), libcgi-session-perl (>= 4.02), libgd-gd2-noxpm-perl (>= 2.07) | libgd-gd2-perl (>= 2.07), libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, perl, Modified: trunk/packages/gmod/gbrowse/trunk/debian/patches/debian-packaging-patch =================================================================== --- trunk/packages/gmod/gbrowse/trunk/debian/patches/debian-packaging-patch 2012-12-14 18:15:11 UTC (rev 12622) +++ trunk/packages/gmod/gbrowse/trunk/debian/patches/debian-packaging-patch 2012-12-15 08:27:24 UTC (rev 12623) @@ -206,7 +206,7 @@ sub ACTION_install { my $self = shift; my $prefix = $self->install_base || $self->prefix || ''; -@@ -773,8 +850,9 @@ +@@ -776,8 +853,9 @@ sub guess_user_account_db { my $self = shift; if (eval "require DBD::SQLite; 1") { @@ -220,7 +220,7 @@ } else { --- a/conf/GBrowse.conf +++ b/conf/GBrowse.conf -@@ -161,9 +161,9 @@ +@@ -163,9 +163,9 @@ # "user_accounts" is true, then GBrowse # will attempt to use its internal user accounts database # to authenticate and/or register users. Modified: trunk/packages/gmod/gbrowse/trunk/debian/patches/manpages.patch =================================================================== --- trunk/packages/gmod/gbrowse/trunk/debian/patches/manpages.patch 2012-12-14 18:15:11 UTC (rev 12622) +++ trunk/packages/gmod/gbrowse/trunk/debian/patches/manpages.patch 2012-12-15 08:27:24 UTC (rev 12623) @@ -178,7 +178,7 @@ =head2 userdata() $path = $source->userdata(@path_components) -@@ -855,6 +861,8 @@ +@@ -871,6 +877,8 @@ croak "Do not call make_link() on the DataSource. Call it on the Render object"; } @@ -187,7 +187,7 @@ =item $db = $dsn->databases Return all named databases from [name:database] tracks. -@@ -1100,6 +1108,8 @@ +@@ -1116,6 +1124,8 @@ %DB_SETTINGS = (); } Modified: trunk/packages/gmod/gbrowse/trunk/debian/patches/skip_check_installed_test.patch =================================================================== --- trunk/packages/gmod/gbrowse/trunk/debian/patches/skip_check_installed_test.patch 2012-12-14 18:15:11 UTC (rev 12622) +++ trunk/packages/gmod/gbrowse/trunk/debian/patches/skip_check_installed_test.patch 2012-12-15 08:27:24 UTC (rev 12623) @@ -6,7 +6,7 @@ Forwarded: not-needed --- a/install_util/GBrowseInstall.pm +++ b/install_util/GBrowseInstall.pm -@@ -633,7 +633,7 @@ +@@ -636,7 +636,7 @@ my $copied = $self->copy_if_modified($_=>'blib'); if ($copied || !$self->up_to_date('_build/config_data',"blib/$_")) { $self->substitute_in_place("blib/$_"); @@ -15,7 +15,7 @@ } } -@@ -695,7 +695,7 @@ +@@ -698,7 +698,7 @@ my $copied = $self->copy_if_modified($base=>'blib'); if ($copied or !$self->up_to_date('_build/config_data',"blib/$base")) { $self->substitute_in_place("blib/$base"); @@ -24,7 +24,7 @@ } } } -@@ -733,7 +733,7 @@ +@@ -736,7 +736,7 @@ my $copied = $self->copy_if_modified($_=>'blib'); if ($copied or !$self->up_to_date('_build/config_data',"blib/$_")) { $self->substitute_in_place("blib/$_"); _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
