Author: lkajan
Date: 2013-04-26 05:57:25 +0000 (Fri, 26 Apr 2013)
New Revision: 13425
Added:
trunk/packages/metastudent-data/trunk/debian/changelog
trunk/packages/metastudent-data/trunk/debian/compat
trunk/packages/metastudent-data/trunk/debian/control
trunk/packages/metastudent-data/trunk/debian/copyright
trunk/packages/metastudent-data/trunk/debian/rules
trunk/packages/metastudent-data/trunk/debian/upstream
trunk/packages/metastudent-data/trunk/debian/watch
Log:
initial Debianization
Added: trunk/packages/metastudent-data/trunk/debian/changelog
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/changelog
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/changelog 2013-04-26
05:57:25 UTC (rev 13425)
@@ -0,0 +1,5 @@
+metastudent-data (1.0.1-1) UNRELEASED; urgency=low
+
+ * Initial release (Closes: #000000)
+
+ -- Tobias Hamp <[email protected]> Fri, 26 Apr 2013 07:43:57 +0200
Added: trunk/packages/metastudent-data/trunk/debian/compat
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/compat
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/compat 2013-04-26 05:57:25 UTC
(rev 13425)
@@ -0,0 +1 @@
+8
Property changes on: trunk/packages/metastudent-data/trunk/debian/compat
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/metastudent-data/trunk/debian/control
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/control
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/control 2013-04-26
05:57:25 UTC (rev 13425)
@@ -0,0 +1,25 @@
+Source: metastudent-data
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team
<[email protected]>
+Uploaders: Tobias Hamp <[email protected]>, Laszlo Kajan <[email protected]>
+Build-Depends-Indep: debhelper (>=8~)
+Standards-Version: 3.9.4
+Homepage: https://rostlab.org/owiki/index.php/Metastudent
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/metastudent-data/trunk/
+Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/metastudent-data/trunk/
+
+Package: metastudent-data
+Architecture: all
+Homepage: http://www.rostlab.org
+Depends: ${misc:Depends}
+Description: predictor of Gene Ontology terms from protein sequence - data
files
+ Often, only the sequence of a protein is known, but
+ not its functions. Metastudent will try to predict
+ missing functional annotations through homology searches (BLAST).
+ .
+ All predicted functions correspond to Gene Ontology (GO)
+ terms from the Molecular Function Ontology (MFO) and the Biological Process
+ Ontology (BPO) and are associated with a reliability score.
+ .
+ This package contains data files for metastudent.
Added: trunk/packages/metastudent-data/trunk/debian/copyright
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/copyright
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/copyright 2013-04-26
05:57:25 UTC (rev 13425)
@@ -0,0 +1,25 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: metastudent-data
+Upstream-Contact: Tobias Hamp <[email protected]>
+Source: ftp://rostlab.org/metastudent/
+
+Files: *
+Copyright: 2011-2013, Tobias Hamp <[email protected]>
+License: GPL-2+
+
+License: GPL-2+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this package; if not, see .
+ .
+ On Debian systems, the complete text of the GNU General Public
+ License version 2 can be found in `/usr/share/common-licenses/GPL-2'
Added: trunk/packages/metastudent-data/trunk/debian/rules
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/rules
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/rules 2013-04-26 05:57:25 UTC
(rev 13425)
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+%:
+ dh $@
+
+override_dh_auto_build:
+ echo TODO >&2
+
+override_dh_auto_install:
+ echo TODO >&2
Property changes on: trunk/packages/metastudent-data/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/metastudent-data/trunk/debian/upstream
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/upstream
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/upstream 2013-04-26
05:57:25 UTC (rev 13425)
@@ -0,0 +1,14 @@
+Name: metastudent-data
+Contact: Tobias Hamp <[email protected]>
+Homepage: https://rostlab.org/owiki/index.php/Metastudent
+Reference:
+ - Author: Tobias Hamp and Rebecca Kassner and Stefan Seemayer and Esmeralda
Vicedo and Christian Schaefer and Dominik Achten and Florian Auer and Ariane
Boehm and Tatjana Braun and Maximilian Hecht and Mark Heron and Peter
Hönigschmid and Thomas A. Hopf and Stefanie Kaufmann and Michael Kiening and
Denis Krompass and Cedric Landerer and Yannick Mahlich and Manfred Roos and
Burkhard Rost
+ Title: 'Homology-based inference sets the bar high for protein function
prediction.'
+ Journal: BMC Bioinformatics
+ Year: 2013
+ Volume: 14
+ Number: 'Suppl 3'
+ Pages: S7
+ DOI: 10.1186/1471-2105-14-S3-S7
+ PMID: 23514582
+ URL: http://www.biomedcentral.com/1471-2105/14/S3/S7/
Added: trunk/packages/metastudent-data/trunk/debian/watch
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/watch
(rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/watch 2013-04-26 05:57:25 UTC
(rev 13425)
@@ -0,0 +1,2 @@
+version=3
+opts=pasv
ftp://rostlab.org/metastudent/metastudent-data-([0-9.]+)\.tar\.[bgx]z debian
uupdate
_______________________________________________
debian-med-commit mailing list
[email protected]
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
