Author: gregoa Date: 2013-05-22 17:00:20 +0000 (Wed, 22 May 2013) New Revision: 13699
Added: trunk/packages/neobio/tags/0.0.20030929-1.1/ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules Removed: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules Log: [svn-buildpackage] Tagging neobio 0.0.20030929-1.1 Deleted: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog =================================================================== --- trunk/packages/neobio/trunk/debian/changelog 2013-05-22 13:13:45 UTC (rev 13697) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog 2013-05-22 17:00:20 UTC (rev 13699) @@ -1,11 +0,0 @@ -neobio (0.0.20030929-2) UNRELEASED; urgency=low - - * Enhanced short description - - -- Andreas Tille <[email protected]> Wed, 30 May 2012 16:22:34 +0200 - -neobio (0.0.20030929-1) unstable; urgency=low - - * Initial release (Closes: #647543) - - -- Christoph Gille <[email protected]> Wed, 30 May 2012 11:21:18 +0200 Copied: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog (from rev 13698, trunk/packages/neobio/trunk/debian/changelog) =================================================================== --- trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog (rev 0) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/changelog 2013-05-22 17:00:20 UTC (rev 13699) @@ -0,0 +1,25 @@ +neobio (0.0.20030929-1.1) unstable; urgency=low + + [ Andreas Tille ] + * Enhanced short description + + [ gregor herrmann ] + * Non-maintainer upload. + * Fix "Transition package to default java implementation": + apply patch from Ubuntu / James Page: + + * Transition package to default java implementation: + - d/control: BD on default-jdk (>= 1:1.6), switch runtime dependency + to default-jre | java6-runtime. + - d/rules: Specify source/target = 1.5 to ensure that backwards + compatible bytecode is built. + + (Closes: #684162) + + -- gregor herrmann <[email protected]> Wed, 22 May 2013 18:53:39 +0200 + +neobio (0.0.20030929-1) unstable; urgency=low + + * Initial release (Closes: #647543) + + -- Christoph Gille <[email protected]> Wed, 30 May 2012 11:21:18 +0200 Deleted: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control =================================================================== --- trunk/packages/neobio/trunk/debian/control 2013-05-22 13:13:45 UTC (rev 13697) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control 2013-05-22 17:00:20 UTC (rev 13699) @@ -1,21 +0,0 @@ -Source: neobio -Section: science -Priority: extra -Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Christoph Gille <[email protected]>, - Andreas Tille <[email protected]> -Build-Depends: debhelper (>= 8), openjdk-6-jdk | sun-java6-jdk, javahelper (>=0.25) -Standards-Version: 3.9.3 -Homepage: http://neobio.sourceforge.net/ -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/neobio/trunk/ -Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/neobio/trunk/ - -Package: neobio -Architecture: all -Depends: openjdk-6-jre | sun-java6-jre, java-wrappers, ${misc:Depends}, ${java:Depends} -Suggests: strap -Enhances: strap -Description: computes alignments of amino acid and nucleotide sequences - Library and graphical user interface for pairwise sequence alignments. - Implementation of the dynamic programming methods of Needleman & Wunsch - (global alignment) and Smith & Waterman (local alignment). Copied: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control (from rev 13698, trunk/packages/neobio/trunk/debian/control) =================================================================== --- trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control (rev 0) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/control 2013-05-22 17:00:20 UTC (rev 13699) @@ -0,0 +1,21 @@ +Source: neobio +Section: science +Priority: extra +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Christoph Gille <[email protected]>, + Andreas Tille <[email protected]> +Build-Depends: debhelper (>= 8), default-jdk (>= 1:1.6), javahelper (>=0.25) +Standards-Version: 3.9.3 +Homepage: http://neobio.sourceforge.net/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/neobio/trunk/ +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/neobio/trunk/ + +Package: neobio +Architecture: all +Depends: default-jre | java6-runtime, java-wrappers, ${misc:Depends}, ${java:Depends} +Suggests: strap +Enhances: strap +Description: computes alignments of amino acid and nucleotide sequences + Library and graphical user interface for pairwise sequence alignments. + Implementation of the dynamic programming methods of Needleman & Wunsch + (global alignment) and Smith & Waterman (local alignment). Deleted: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules =================================================================== --- trunk/packages/neobio/trunk/debian/rules 2013-05-22 13:13:45 UTC (rev 13697) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules 2013-05-22 17:00:20 UTC (rev 13699) @@ -1,24 +0,0 @@ -#!/usr/bin/make -f -# -*- makefile -*- - -# Uncomment this to turn on verbose mode. -#export DH_VERBOSE=1 - -VERSION := $(shell dpkg-parsechangelog | grep '^Version:' | sed 's/^Version: \(.*\)-1/\1/') - -%: - dh $@ --with javahelper - - -override_dh_auto_build: - mkdir -p classes - javac -cp src -d classes $(shell find src -name "*.java") - jar -cf neobio-$(VERSION).jar -C classes neobio -C bin neobio/gui/icons - -override_dh_clean: - rm -f neobio*.jar - rm -rf classes - dh_clean - -get-orig-source: - . debian/get-orig-source Copied: trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules (from rev 13698, trunk/packages/neobio/trunk/debian/rules) =================================================================== --- trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules (rev 0) +++ trunk/packages/neobio/tags/0.0.20030929-1.1/debian/rules 2013-05-22 17:00:20 UTC (rev 13699) @@ -0,0 +1,24 @@ +#!/usr/bin/make -f +# -*- makefile -*- + +# Uncomment this to turn on verbose mode. +#export DH_VERBOSE=1 + +VERSION := $(shell dpkg-parsechangelog | grep '^Version:' | sed 's/^Version: \(.*\)-1/\1/') + +%: + dh $@ --with javahelper + + +override_dh_auto_build: + mkdir -p classes + javac -cp src -source 1.5 -target 1.5 -d classes $(shell find src -name "*.java") + jar -cf neobio-$(VERSION).jar -C classes neobio -C bin neobio/gui/icons + +override_dh_clean: + rm -f neobio*.jar + rm -rf classes + dh_clean + +get-orig-source: + . debian/get-orig-source _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
