Author: ogi Date: 2013-05-29 21:07:24 +0000 (Wed, 29 May 2013) New Revision: 13752
Modified: trunk/packages/bowtie/trunk/debian/changelog trunk/packages/bowtie/trunk/debian/control trunk/packages/bowtie/trunk/debian/rules Log: * Lintian fixes: - Removed DM-Upload-Allowed field. - Standards Version 3.9.4 (no changes needed). - Remove execute bits on some files in bowtie-examples. * Don't compress *.ebwt index files in bowtie-examples package. * Package description now starts with a capital letter. Modified: trunk/packages/bowtie/trunk/debian/changelog =================================================================== --- trunk/packages/bowtie/trunk/debian/changelog 2013-05-29 21:00:17 UTC (rev 13751) +++ trunk/packages/bowtie/trunk/debian/changelog 2013-05-29 21:07:24 UTC (rev 13752) @@ -1,3 +1,14 @@ +bowtie (1.0.0-4) unstable; urgency=low + + * Lintian fixes: + - Removed DM-Upload-Allowed field. + - Standards Version 3.9.4 (no changes needed). + - Remove execute bits on some files in bowtie-examples. + * Don't compress *.ebwt index files in bowtie-examples package. + * Package description now starts with a capital letter. + + -- Ognyan Kulev <[email protected]> Wed, 29 May 2013 22:53:13 +0300 + bowtie (1.0.0-3) unstable; urgency=low * New patch no_hash_style_both_for_mips.patch. Modified: trunk/packages/bowtie/trunk/debian/control =================================================================== --- trunk/packages/bowtie/trunk/debian/control 2013-05-29 21:00:17 UTC (rev 13751) +++ trunk/packages/bowtie/trunk/debian/control 2013-05-29 21:07:24 UTC (rev 13752) @@ -2,13 +2,12 @@ Section: science Priority: extra Maintainer: Debian Med Packaging Team <[email protected]> -DM-Upload-Allowed: yes Uploaders: Steffen Moeller <[email protected]>, Yask Gupta <[email protected]>, Andreas Tille <[email protected]>, Ognyan Kulev <[email protected]> Build-Depends: debhelper (>= 9), help2man, seqan-dev (>= 1.3) -Standards-Version: 3.9.3 +Standards-Version: 3.9.4 Homepage: http://bowtie-bio.sourceforge.net/ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/bowtie/trunk Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bowtie/trunk/ @@ -17,7 +16,7 @@ Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} Suggests: bowtie-examples -Description: ultrafast memory-efficient short read aligner +Description: Ultrafast memory-efficient short read aligner This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the Modified: trunk/packages/bowtie/trunk/debian/rules =================================================================== --- trunk/packages/bowtie/trunk/debian/rules 2013-05-29 21:00:17 UTC (rev 13751) +++ trunk/packages/bowtie/trunk/debian/rules 2013-05-29 21:07:24 UTC (rev 13752) @@ -24,6 +24,15 @@ help2man --name="extracts information from a bowtie index" --no-info \ $(CURDIR)/bowtie-inspect > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/bowtie-inspect.1 +override_dh_compress: + dh_compress -X.ebwt + +override_dh_fixperms: + dh_fixperms + chmod 644 debian/bowtie-examples/usr/share/doc/bowtie/examples/indexes/* +# Following line is not needed because gzipped genome (by dh_compress) is always 644. +# chmod 644 debian/bowtie-examples/usr/share/doc/bowtie/examples/genomes/* + override_dh_auto_clean: rm -f .bowtie* dh_auto_clean _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
