Author: tille
Date: 2013-07-30 08:48:04 +0000 (Tue, 30 Jul 2013)
New Revision: 14259
Added:
trunk/packages/ampliconnoise/trunk/debian/doc-base
trunk/packages/ampliconnoise/trunk/debian/docs
Removed:
trunk/packages/ampliconnoise/trunk/debian/ampliconnoise.docs
trunk/packages/ampliconnoise/trunk/debian/docs
Modified:
trunk/packages/ampliconnoise/trunk/debian/changelog
trunk/packages/ampliconnoise/trunk/debian/rules
Log:
Add doc-base file
Deleted: trunk/packages/ampliconnoise/trunk/debian/ampliconnoise.docs
===================================================================
--- trunk/packages/ampliconnoise/trunk/debian/ampliconnoise.docs
2013-07-30 08:15:11 UTC (rev 14258)
+++ trunk/packages/ampliconnoise/trunk/debian/ampliconnoise.docs
2013-07-30 08:48:04 UTC (rev 14259)
@@ -1 +0,0 @@
-Doc.pdf
Modified: trunk/packages/ampliconnoise/trunk/debian/changelog
===================================================================
--- trunk/packages/ampliconnoise/trunk/debian/changelog 2013-07-30 08:15:11 UTC
(rev 14258)
+++ trunk/packages/ampliconnoise/trunk/debian/changelog 2013-07-30 08:48:04 UTC
(rev 14259)
@@ -10,6 +10,9 @@
stripped off their tarball
* debian/README.source: Removed because it became now
unneeded.
+ * debian/doc-base: created
+ * debian/rules:
+ - do not compress pdf files
-- Andreas Tille <[email protected]> Tue, 30 Jul 2013 09:49:02 +0200
Added: trunk/packages/ampliconnoise/trunk/debian/doc-base
===================================================================
--- trunk/packages/ampliconnoise/trunk/debian/doc-base
(rev 0)
+++ trunk/packages/ampliconnoise/trunk/debian/doc-base 2013-07-30 08:48:04 UTC
(rev 14259)
@@ -0,0 +1,19 @@
+Document: ampliconnoise
+Title: Documentation of Tools for Noise Removal from Pyrosequenced Amplicons
+Author: Christopher Quince <[email protected]>
+Abstract: Programs for the removal of noise from 454 sequenced PCR amplicons
+ AmpliconNoise is a package of applications to clean up high-throughput
+ sequence data. It consists of three main parts:
+ .
+ Pyronoise - does flowgram-based clustering to spot misreads
+ SeqNoise - removes PCR point mutations
+ Perseus - removes PCR chimeras without the need for a set of reference
+ sequences
+ .
+ Previously there was a standalone "Pyronoise" by the same authors and
+ this package includes an updated version. There is also a "Denoiser"
+ in Qiime which is related but distinct.
+Section: Science/Biology
+
+Format: pdf
+Files: /usr/share/doc/ampliconnoise/Doc.pdf
Deleted: trunk/packages/ampliconnoise/trunk/debian/docs
===================================================================
Copied: trunk/packages/ampliconnoise/trunk/debian/docs (from rev 14255,
trunk/packages/ampliconnoise/trunk/debian/ampliconnoise.docs)
===================================================================
--- trunk/packages/ampliconnoise/trunk/debian/docs
(rev 0)
+++ trunk/packages/ampliconnoise/trunk/debian/docs 2013-07-30 08:48:04 UTC
(rev 14259)
@@ -0,0 +1 @@
+Doc.pdf
Modified: trunk/packages/ampliconnoise/trunk/debian/rules
===================================================================
--- trunk/packages/ampliconnoise/trunk/debian/rules 2013-07-30 08:15:11 UTC
(rev 14258)
+++ trunk/packages/ampliconnoise/trunk/debian/rules 2013-07-30 08:48:04 UTC
(rev 14259)
@@ -35,6 +35,9 @@
ln -s ampliconnoise.1
debian/ampliconnoise/usr/share/man/man1/`basename "$$f"`.1 ; \
done )
+override_dh_compress:
+ dh_compress --exclude=.pdf
+
#get-orig-source:
# uscan --verbose --force-download --repack-compression xz
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