Author: plessy Date: 2013-08-10 02:49:40 +0000 (Sat, 10 Aug 2013) New Revision: 14418
Modified: trunk/packages/staden-io-lib/trunk/debian/libstaden-read1.symbols Log: Updated symbols with the patch from dpkg-gensymbols. Modified: trunk/packages/staden-io-lib/trunk/debian/libstaden-read1.symbols =================================================================== --- trunk/packages/staden-io-lib/trunk/debian/libstaden-read1.symbols 2013-08-10 01:59:11 UTC (rev 14417) +++ trunk/packages/staden-io-lib/trunk/debian/libstaden-read1.symbols 2013-08-10 02:49:40 UTC (rev 14418) @@ -36,6 +36,7 @@ MD5_Update@Base 1.13.1 abi_reset_data_counts@Base 1.12.4 abi_set_data_counts@Base 1.12.4 + bam_add_raw@Base 1.13.2-1 bam_aux_A@Base 1.13.1 bam_aux_Z@Base 1.13.1 bam_aux_add@Base 1.13.1 @@ -50,11 +51,15 @@ bam_aux_size_vec@Base 1.13.1 bam_close@Base 1.13.1 bam_construct_seq@Base 1.13.1 - bam_get_line@Base 1.13.1 + bam_copy@Base 1.13.2-1 + bam_dup@Base 1.13.2-1 +#MISSING: 1.13.2-1# bam_get_line@Base 1.13.1 bam_get_seq@Base 1.13.1 bam_next_seq@Base 1.13.1 bam_open@Base 1.13.1 bam_put_seq@Base 1.13.1 + bam_set_option@Base 1.13.2-1 + bam_set_voption@Base 1.13.2-1 bam_write_header@Base 1.13.1 be_read_int_1@Base 1.12.4 be_read_int_2@Base 1.12.4 @@ -64,6 +69,8 @@ be_write_int_2@Base 1.12.4 be_write_int_4@Base 1.12.4 be_write_int_8@Base 1.12.4 + bgzf_decode_thread@Base 1.13.2-1 + bgzf_encode_thread@Base 1.13.2-1 bit_reverse@Base 1.12.4 block_create@Base 1.12.4 block_destroy@Base 1.12.4 @@ -80,9 +87,11 @@ compressed_file_exists@Base 1.12.4 conf2str@Base 1.12.4 construct_trace_name@Base 1.12.4 - cram_beta_decode@Base 1.13.1 +#MISSING: 1.13.2-1# cram_beta_decode@Base 1.13.1 + cram_beta_decode_char@Base 1.13.2-1 cram_beta_decode_free@Base 1.13.1 cram_beta_decode_init@Base 1.13.1 + cram_beta_decode_int@Base 1.13.2-1 cram_beta_encode_char@Base 1.13.1 cram_beta_encode_free@Base 1.13.1 cram_beta_encode_init@Base 1.13.1 @@ -111,6 +120,8 @@ cram_decode_compression_header@Base 1.13.1 cram_decode_slice@Base 1.13.1 cram_decode_slice_header@Base 1.13.1 + cram_decode_slice_mt@Base 1.13.2-1 + cram_decode_slice_thread@Base 1.13.2-1 cram_decoder_init@Base 1.13.1 cram_encode_compression_header@Base 1.13.1 cram_encode_container@Base 1.13.1 @@ -129,6 +140,8 @@ cram_external_encode_store@Base 1.13.1 cram_flush@Base 1.13.1 cram_flush_container@Base 1.13.1 + cram_flush_container_mt@Base 1.13.2-1 + cram_flush_thread@Base 1.13.2-1 cram_free_block@Base 1.13.1 cram_free_compression_header@Base 1.13.1 cram_free_container@Base 1.13.1 @@ -170,6 +183,9 @@ cram_read_container@Base 1.13.1 cram_read_file_def@Base 1.13.1 cram_read_slice@Base 1.13.1 + cram_ref_decr@Base 1.13.2-1 + cram_ref_incr@Base 1.13.2-1 + cram_ref_load@Base 1.13.2-1 cram_seek@Base 1.13.1 cram_seek_to_refpos@Base 1.13.1 cram_set_option@Base 1.13.1 @@ -445,6 +461,7 @@ recorrelate2@Base 1.12.4 recorrelate4@Base 1.12.4 refs2id@Base 1.13.1 + refs_free@Base 1.13.2-1 remove_extension@Base 1.12.4 remove_file@Base 1.12.4 restore_codes@Base 1.12.4 @@ -454,6 +471,7 @@ sam_hdr_add@Base 1.13.1 sam_hdr_add_PG@Base 1.13.1 sam_hdr_add_lines@Base 1.13.1 + sam_hdr_decr_ref@Base 1.13.2-1 sam_hdr_dump@Base 1.13.1 sam_hdr_dup@Base 1.13.1 sam_hdr_find@Base 1.13.1 @@ -461,6 +479,7 @@ sam_hdr_find_line@Base 1.13.1 sam_hdr_find_rg@Base 1.13.1 sam_hdr_free@Base 1.13.1 + sam_hdr_incr_ref@Base 1.13.2-1 sam_hdr_length@Base 1.13.1 sam_hdr_link_pg@Base 1.13.1 sam_hdr_name2ref@Base 1.13.1 @@ -481,6 +500,8 @@ scram_get_header@Base 1.13.1 scram_get_refs@Base 1.13.1 scram_get_seq@Base 1.13.1 + scram_input_bam_block@Base 1.13.2-1 + scram_line@Base 1.13.2-1 scram_next_seq@Base 1.13.1 scram_open@Base 1.13.1 scram_put_seq@Base 1.13.1 @@ -545,6 +566,19 @@ string_pool_create@Base 1.13.1 string_pool_destroy@Base 1.13.1 stringify_argv@Base 1.13.1 + t_pool_delete_result@Base 1.13.2-1 + t_pool_destroy@Base 1.13.2-1 + t_pool_dispatch2@Base 1.13.2-1 + t_pool_dispatch@Base 1.13.2-1 + t_pool_flush@Base 1.13.2-1 + t_pool_init@Base 1.13.2-1 + t_pool_next_result@Base 1.13.2-1 + t_pool_next_result_wait@Base 1.13.2-1 + t_pool_results_queue_empty@Base 1.13.2-1 + t_pool_results_queue_len@Base 1.13.2-1 + t_pool_results_queue_sz@Base 1.13.2-1 + t_results_queue_destroy@Base 1.13.2-1 + t_results_queue_init@Base 1.13.2-1 tokenise_search_path@Base 1.13.1 trace_type_int2str@Base 1.12.4 trace_type_str2int@Base 1.12.4 _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
