Author: osallou-guest Date: 2013-09-04 06:43:30 +0000 (Wed, 04 Sep 2013) New Revision: 14556
Added: trunk/packages/biomaj/tags/1.2.2-2/ trunk/packages/biomaj/tags/1.2.2-2/debian/changelog trunk/packages/biomaj/tags/1.2.2-2/debian/postinst Removed: trunk/packages/biomaj/tags/1.2.2-2/debian/changelog trunk/packages/biomaj/tags/1.2.2-2/debian/postinst Log: [svn-buildpackage] Tagging biomaj 1.2.2-2 Deleted: trunk/packages/biomaj/tags/1.2.2-2/debian/changelog =================================================================== --- trunk/packages/biomaj/trunk/debian/changelog 2013-09-02 09:13:37 UTC (rev 14554) +++ trunk/packages/biomaj/tags/1.2.2-2/debian/changelog 2013-09-04 06:43:30 UTC (rev 14556) @@ -1,171 +0,0 @@ -biomaj (1.2.2-1) unstable; urgency=low - - * New upstream release with minor fixes - d/patches/series: upstream bug 15914 fixed. - - -- Olivier Sallou <[email protected]> Tue, 18 Jun 2013 14:30:28 +0200 - -biomaj (1.2.1-3) unstable; urgency=low - - * Add patch to manage ant properties api change (Closes: #712328). - - -- Olivier Sallou <[email protected]> Tue, 18 Jun 2013 11:39:36 +0200 - -biomaj (1.2.1-2) unstable; urgency=low - - * Add patch to match libjgoodies-form-java >1.3, - FormFactory replaced by FormSpecs (Closes: #708454) - d/control: Depends on libjgoodies-form-java > 1.3 - - -- Olivier Sallou <[email protected]> Sun, 19 May 2013 13:21:55 +0200 - -biomaj (1.2.1-1) unstable; urgency=low - - * New usptream release - * Add Japanase debconf translation (Closes: #690698) - Thanks to victory <[email protected]> - - -- Olivier Sallou <[email protected]> Fri, 19 Oct 2012 17:04:19 +0200 - -biomaj (1.2.0-10) unstable; urgency=low - - * debian/rules, debian/postinst: fix permissions on - properties file. - - -- Olivier Sallou <[email protected]> Thu, 04 Oct 2012 18:34:01 +0200 - -biomaj (1.2.0-9) unstable; urgency=low - - * debian/patches/set_env_file_for_debian: - Prevent env.sh file update by program at install - (Closes: #688433) - - -- Olivier Sallou <[email protected]> Wed, 03 Oct 2012 13:54:44 +0200 - -biomaj (1.2.0-8) unstable; urgency=low - - [ Olivier Sallou ] - * debian/copyright: Fix copyright URL - * debian/control: Switch to Standards 3.9.4 - * debian/rules, debian/postinst, debian/postrm: fix conffile update - conflicting with Debian Policy (Closes: #688433). - - -- Olivier Sallou <[email protected]> Wed, 01 Aug 2012 15:59:55 +0200 - -biomaj (1.2.0-7) unstable; urgency=low - - [ Olivier Sallou ] - Patch from James Page <[email protected]> (Closes: #683517) - * Transition package to use default java implementation: - - d/rules: Specify source/target = 1.5 to ensure bytecode is backwards - compatible. - - d/control: BD on default-jdk only. Switch runtime dependency to - default-jre | java6-runtime. - - -- Olivier Sallou <[email protected]> Wed, 01 Aug 2012 14:58:41 +0200 - -biomaj (1.2.0-6) unstable; urgency=low - - [ Olivier Sallou ] - * Clean files for purge (Closes: #678490). - - [ Andreas Tille ] - * debian/upstream: Enhance upstream information (authors format, missing - fields) - - [Debconf translation updates] - * French (Olivier Sallou, proofread by the French l10n team). - - -- Olivier Sallou <[email protected]> Tue, 08 May 2012 22:46:34 +0200 - -biomaj (1.2.0-5) unstable; urgency=low - - * Add missing file to package to get the console help (Closes: #658833) - - biomaj.install - - -- Olivier Sallou <[email protected]> Wed, 01 Feb 2012 10:00:03 +0100 - -biomaj (1.2.0-4) unstable; urgency=low - - * [Olivier Sallou] - * config: remove biomaj/jdk_home, not needed anymore - - * Debconf templates and debian/control reviewed by the debian-l10n- - english team as part of the Smith review project. Closes: #653408 - * [Debconf translation updates] - * Russian (Yuri Kozlov). Closes: #656111 - * Italian (Francesca Ciceri). Closes: #656254 - * French (Olivier Sallou). Closes: #656066 - * Czech (Michal Simunek). Closes: #656670 - * Dutch; (Jeroen Schot). Closes: #657009 - * German (Chris Leick). Closes: #657024 - * Danish (Joe Hansen). Closes: #657341 - * Indonesian (Mahyuddin Susanto). Closes: #657463 - * Spanish; (Camaleón). Closes: #657491 - * Polish (Michał Kułach). Closes: #657512 - * Swedish (Martin Bagge / brother). Closes: #657548 - * Portuguese (Miguel Figueiredo). Closes: #657664 - - - -- Olivier Sallou <[email protected]> Fri, 16 Dec 2011 15:53:10 +0100 - -biomaj (1.2.0-3) unstable; urgency=low - - * Add Portuguese translation for debconf (Closes: #651680) - - Thanks to Pedro Ribeiro <[email protected]> - - -- Olivier Sallou <[email protected]> Fri, 16 Dec 2011 09:25:22 +0100 - -biomaj (1.2.0-2) unstable; urgency=low - - * Fix Mysql dependency name. - - -- Olivier Sallou <[email protected]> Fri, 11 Nov 2011 10:25:39 +0100 - -biomaj (1.2.0-1) unstable; urgency=low - - * New upstream release with new features and bug fixes. - * Change in database model, migration script ran at install - * New post processes added in default install (emboss) - - -- Olivier Sallou <[email protected]> Thu, 18 Aug 2011 09:55:23 +0200 - -biomaj (1.1.0-3) unstable; urgency=low - - * Change priority in debconf message for jdk home - * Add spanish translation of debconf: - Thanks to Camaleón <[email protected]> - Closes: #632952 - * Add sweden translation of debconf: - Thanks to Martin Bagge <[email protected]> - Closes: #628927 - * Add german translation of debconf: - Thanks to Chris Leick <[email protected]> - Closes: #629455 - * Change openjdk dependency to add default-jdk and sun jdk possible depends - Closes: #633523 - - -- Olivier Sallou <[email protected]> Thu, 11 Jul 2011 09:55:23 +0200 - -biomaj (1.1.0-2) unstable; urgency=low - - * Add russian translation of debconf: - Thanks to Yuri Kozlov <[email protected]> - Closes: #623807 - * debian/patches/fix623558_remove_pid: - Remove unnecessary pid file creation - Closes: #623558 - * debian/postrm,debian/preinst: - Issue for smooth upgrade, require old package - removal then new package install - Closes: #624284 - - - -- Olivier Sallou <[email protected]> Fri, 22 Apr 2011 16:27:11 +0200 - -biomaj (1.1.0-1) unstable; urgency=low - - * Initial release (Closes: #609038) - First Debian package, fixed copyright file to list all licenses - - -- Olivier Sallou <[email protected]> Wed, 05 Jan 2011 10:39:00 +0100 Copied: trunk/packages/biomaj/tags/1.2.2-2/debian/changelog (from rev 14555, trunk/packages/biomaj/trunk/debian/changelog) =================================================================== --- trunk/packages/biomaj/tags/1.2.2-2/debian/changelog (rev 0) +++ trunk/packages/biomaj/tags/1.2.2-2/debian/changelog 2013-09-04 06:43:30 UTC (rev 14556) @@ -0,0 +1,177 @@ +biomaj (1.2.2-2) unstable; urgency=low + + * d/postinst: Fix install in noninteractive mode (Closes: #721773). + + -- Olivier Sallou <[email protected]> Fri, 30 Aug 2013 12:11:50 +0200 + +biomaj (1.2.2-1) unstable; urgency=low + + * New upstream release with minor fixes + d/patches/series: upstream bug 15914 fixed. + + -- Olivier Sallou <[email protected]> Tue, 18 Jun 2013 14:30:28 +0200 + +biomaj (1.2.1-3) unstable; urgency=low + + * Add patch to manage ant properties api change (Closes: #712328). + + -- Olivier Sallou <[email protected]> Tue, 18 Jun 2013 11:39:36 +0200 + +biomaj (1.2.1-2) unstable; urgency=low + + * Add patch to match libjgoodies-form-java >1.3, + FormFactory replaced by FormSpecs (Closes: #708454) + d/control: Depends on libjgoodies-form-java > 1.3 + + -- Olivier Sallou <[email protected]> Sun, 19 May 2013 13:21:55 +0200 + +biomaj (1.2.1-1) unstable; urgency=low + + * New usptream release + * Add Japanase debconf translation (Closes: #690698) + Thanks to victory <[email protected]> + + -- Olivier Sallou <[email protected]> Fri, 19 Oct 2012 17:04:19 +0200 + +biomaj (1.2.0-10) unstable; urgency=low + + * debian/rules, debian/postinst: fix permissions on + properties file. + + -- Olivier Sallou <[email protected]> Thu, 04 Oct 2012 18:34:01 +0200 + +biomaj (1.2.0-9) unstable; urgency=low + + * debian/patches/set_env_file_for_debian: + Prevent env.sh file update by program at install + (Closes: #688433) + + -- Olivier Sallou <[email protected]> Wed, 03 Oct 2012 13:54:44 +0200 + +biomaj (1.2.0-8) unstable; urgency=low + + [ Olivier Sallou ] + * debian/copyright: Fix copyright URL + * debian/control: Switch to Standards 3.9.4 + * debian/rules, debian/postinst, debian/postrm: fix conffile update + conflicting with Debian Policy (Closes: #688433). + + -- Olivier Sallou <[email protected]> Wed, 01 Aug 2012 15:59:55 +0200 + +biomaj (1.2.0-7) unstable; urgency=low + + [ Olivier Sallou ] + Patch from James Page <[email protected]> (Closes: #683517) + * Transition package to use default java implementation: + - d/rules: Specify source/target = 1.5 to ensure bytecode is backwards + compatible. + - d/control: BD on default-jdk only. Switch runtime dependency to + default-jre | java6-runtime. + + -- Olivier Sallou <[email protected]> Wed, 01 Aug 2012 14:58:41 +0200 + +biomaj (1.2.0-6) unstable; urgency=low + + [ Olivier Sallou ] + * Clean files for purge (Closes: #678490). + + [ Andreas Tille ] + * debian/upstream: Enhance upstream information (authors format, missing + fields) + + [Debconf translation updates] + * French (Olivier Sallou, proofread by the French l10n team). + + -- Olivier Sallou <[email protected]> Tue, 08 May 2012 22:46:34 +0200 + +biomaj (1.2.0-5) unstable; urgency=low + + * Add missing file to package to get the console help (Closes: #658833) + - biomaj.install + + -- Olivier Sallou <[email protected]> Wed, 01 Feb 2012 10:00:03 +0100 + +biomaj (1.2.0-4) unstable; urgency=low + + * [Olivier Sallou] + * config: remove biomaj/jdk_home, not needed anymore + + * Debconf templates and debian/control reviewed by the debian-l10n- + english team as part of the Smith review project. Closes: #653408 + * [Debconf translation updates] + * Russian (Yuri Kozlov). Closes: #656111 + * Italian (Francesca Ciceri). Closes: #656254 + * French (Olivier Sallou). Closes: #656066 + * Czech (Michal Simunek). Closes: #656670 + * Dutch; (Jeroen Schot). Closes: #657009 + * German (Chris Leick). Closes: #657024 + * Danish (Joe Hansen). Closes: #657341 + * Indonesian (Mahyuddin Susanto). Closes: #657463 + * Spanish; (Camaleón). Closes: #657491 + * Polish (Michał Kułach). Closes: #657512 + * Swedish (Martin Bagge / brother). Closes: #657548 + * Portuguese (Miguel Figueiredo). Closes: #657664 + + + -- Olivier Sallou <[email protected]> Fri, 16 Dec 2011 15:53:10 +0100 + +biomaj (1.2.0-3) unstable; urgency=low + + * Add Portuguese translation for debconf (Closes: #651680) + - Thanks to Pedro Ribeiro <[email protected]> + + -- Olivier Sallou <[email protected]> Fri, 16 Dec 2011 09:25:22 +0100 + +biomaj (1.2.0-2) unstable; urgency=low + + * Fix Mysql dependency name. + + -- Olivier Sallou <[email protected]> Fri, 11 Nov 2011 10:25:39 +0100 + +biomaj (1.2.0-1) unstable; urgency=low + + * New upstream release with new features and bug fixes. + * Change in database model, migration script ran at install + * New post processes added in default install (emboss) + + -- Olivier Sallou <[email protected]> Thu, 18 Aug 2011 09:55:23 +0200 + +biomaj (1.1.0-3) unstable; urgency=low + + * Change priority in debconf message for jdk home + * Add spanish translation of debconf: + Thanks to Camaleón <[email protected]> + Closes: #632952 + * Add sweden translation of debconf: + Thanks to Martin Bagge <[email protected]> + Closes: #628927 + * Add german translation of debconf: + Thanks to Chris Leick <[email protected]> + Closes: #629455 + * Change openjdk dependency to add default-jdk and sun jdk possible depends + Closes: #633523 + + -- Olivier Sallou <[email protected]> Thu, 11 Jul 2011 09:55:23 +0200 + +biomaj (1.1.0-2) unstable; urgency=low + + * Add russian translation of debconf: + Thanks to Yuri Kozlov <[email protected]> + Closes: #623807 + * debian/patches/fix623558_remove_pid: + Remove unnecessary pid file creation + Closes: #623558 + * debian/postrm,debian/preinst: + Issue for smooth upgrade, require old package + removal then new package install + Closes: #624284 + + + -- Olivier Sallou <[email protected]> Fri, 22 Apr 2011 16:27:11 +0200 + +biomaj (1.1.0-1) unstable; urgency=low + + * Initial release (Closes: #609038) + First Debian package, fixed copyright file to list all licenses + + -- Olivier Sallou <[email protected]> Wed, 05 Jan 2011 10:39:00 +0100 Deleted: trunk/packages/biomaj/tags/1.2.2-2/debian/postinst =================================================================== --- trunk/packages/biomaj/trunk/debian/postinst 2013-09-02 09:13:37 UTC (rev 14554) +++ trunk/packages/biomaj/tags/1.2.2-2/debian/postinst 2013-09-04 06:43:30 UTC (rev 14556) @@ -1,50 +0,0 @@ -#!/bin/sh - -set -e - -# Source debconf library. -. /usr/share/debconf/confmodule - -case "$1" in - configure) - ant_home="/usr/share/ant" - biomaj_root="/usr/share/biomaj" - jdk_home=$(readlink -f /usr/bin/javac | sed "s:/bin/javac::") - db_type="MySQL" - db_get biomaj/mysql_host - db_url="jdbc:mysql://$RET/biomaj_log" - db_get biomaj/mysql_login - db_login="$RET" - db_get biomaj/mysql_passwd - db_passwd="$RET" - - tomcat_port="0" - - cd $biomaj_root - - if [ ! -e /etc/biomaj/db_properties/global.properties ]; then - # If no configuration file exits, create one with template and debconf configuration - cp /usr/share/biomaj/global.properties.tpl /etc/biomaj/db_properties/global.properties - fi - java -cp $biomaj_root/bin Configurator java_home:=$jdk_home ant_home:=$ant_home biomaj_root:=$biomaj_root db_type:=$db_type db_url:=$db_url db_login:=$db_login db_passwd:=$db_passwd - - if [ ! -e /usr/share/biomaj/sql/migration ]; then - ln -s /var/lib/biomaj/migration /usr/share/biomaj/sql/migration - fi - # Database and scripts install and upgrades - perl /var/lib/biomaj/migration/update.pl -dbuser $db_login -dbpwd $db_passwd -db mysql - - ;; - - abort-upgrade|abort-remove|abort-deconfigure) - ;; - - *) - echo "postinst called with unknown argument \`$1'" >&2 - exit 1 - ;; -esac - - - -#DEBHELPER# Copied: trunk/packages/biomaj/tags/1.2.2-2/debian/postinst (from rev 14555, trunk/packages/biomaj/trunk/debian/postinst) =================================================================== --- trunk/packages/biomaj/tags/1.2.2-2/debian/postinst (rev 0) +++ trunk/packages/biomaj/tags/1.2.2-2/debian/postinst 2013-09-04 06:43:30 UTC (rev 14556) @@ -0,0 +1,53 @@ +#!/bin/sh + +set -e + +# Source debconf library. +. /usr/share/debconf/confmodule + +case "$1" in + configure) + ant_home="/usr/share/ant" + biomaj_root="/usr/share/biomaj" + jdk_home=$(readlink -f /usr/bin/javac | sed "s:/bin/javac::") + db_type="MySQL" + db_get biomaj/mysql_host + db_host="$RET" + db_url="jdbc:mysql://$RET/biomaj_log" + db_get biomaj/mysql_login + db_login="$RET" + db_get biomaj/mysql_passwd + db_passwd="$RET" + + tomcat_port="0" + + cd $biomaj_root + + if [ ! -e /etc/biomaj/db_properties/global.properties ]; then + # If no configuration file exits, create one with template and debconf configuration + cp /usr/share/biomaj/global.properties.tpl /etc/biomaj/db_properties/global.properties + fi + java -cp $biomaj_root/bin Configurator java_home:=$jdk_home ant_home:=$ant_home biomaj_root:=$biomaj_root db_type:=$db_type db_url:=$db_url db_login:=$db_login db_passwd:=$db_passwd + + if [ ! -e /usr/share/biomaj/sql/migration ]; then + ln -s /var/lib/biomaj/migration /usr/share/biomaj/sql/migration + fi + # Database and scripts install and upgrades + if [ "$DEBIAN_FRONTEND" != "noninteractive" ]; then + perl /var/lib/biomaj/migration/update.pl -dbuser $db_login -dbpwd $db_passwd -db mysql -dbhost $db_host + fi + + ;; + + abort-upgrade|abort-remove|abort-deconfigure) + ;; + + *) + echo "postinst called with unknown argument \`$1'" >&2 + exit 1 + ;; +esac + + + +#DEBHELPER# _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
