Author: osallou Date: 2013-09-10 08:40:47 +0000 (Tue, 10 Sep 2013) New Revision: 14645
Added: trunk/packages/biojava/tags/1:1.7.1-3/ trunk/packages/biojava/tags/1:1.7.1-3/debian/control Removed: trunk/packages/biojava/tags/1:1.7.1-3/debian/control Log: [svn-buildpackage] Tagging biojava-live 1:1.7.1-3 Deleted: trunk/packages/biojava/tags/1:1.7.1-3/debian/control =================================================================== --- trunk/packages/biojava/branches/1.7.1/debian/control 2013-09-10 07:51:11 UTC (rev 14643) +++ trunk/packages/biojava/tags/1:1.7.1-3/debian/control 2013-09-10 08:40:47 UTC (rev 14645) @@ -1,81 +0,0 @@ -Source: biojava-live -Section: java -Priority: optional -Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Steffen Moeller <[email protected]>, - Andreas Tille <[email protected]> -Build-Depends-Indep: libcommons-dbcp-java (>= 1.1), libhsqldb-java, - libcommons-collections3-java (>= 2.1), libcommons-pool-java (>= 1.1), - libbytecode-java (>= 0.92.cvs.20070925), - default-jdk, junit4, - ant-optional -Build-Depends: debhelper (>= 9), cdbs, ant -Standards-Version: 3.9.4 -Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/biojava/trunk/ -Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/biojava/trunk/ -Homepage: http://www.biojava.org - -Package: libbiojava1.7-java -Architecture: all -Depends: ${shlibs:Depends}, ${misc:Depends}, - libcommons-pool-java (>= 1.1), - libcommons-collections-java (>= 2.1), - libcommons-dbcp-java (>= 1.1), - libhsqldb-java, - libbytecode-java -Suggests: java-virtual-machine, libjgrapht-java, libbiojava-java, libbiojava-java-doc -Conflicts: libbiojava1.6-java -Replaces: libbiojava1.6-java -Description: Java API to biological data and applications (version 1.7) - This package presents the Open Source Java API to biological databases - and a series of mostly sequence-based algorithms. The APIs are not - compatible between versions. In analogy to the dealing with shared - libraries of the C language, the jar file of this package has the - API version in its name. It is symbolically linked to the expected - biojava.jar filename in the package libbiojava-java. This will help - keeping multiple versions of the biojava API in parallel. - -Package: libbiojava-java -Architecture: all -Depends: libbiojava1.7-java, ${misc:Depends} -Conflicts: libbiojava1.6-java -Replaces: libbiojava1.6-java -Description: Java API to biological data and applications (default version) - BioJava is an open-source project dedicated to providing a Java framework - for processing biological data. It includes objects for manipulating - sequences, file parsers, DAS client and server support, access to BioSQL - and Ensembl databases, and powerful analysis and statistical routines - including a dynamic programming toolkit. - . - BioJava is provided by a vibrant community which meets annually at - the Bioinformatics Open Source Conference (BOSC) that traditionally - accompanies the Intelligent Systems in Molecular Biology (ISMB) - meeting. Much like BioPerl, the employment of this library is valuable - for everybody active in the field because of the many tricks of the - trade one learns just by communicating on the mailing list. - . - This is a wrapper package which should enable smooth upgrades to new - versions. - -Package: libbiojava-java-demos -Architecture: all -Depends: ${misc:Depends} -Recommends: libbiojava-java -Description: Example programs for BioJava - The package comes with a wealth of use cases for BioJava. It is generated - together with the API documentation but because of its size of ~3.7MB it - was decided to distribute it separately. - - -Package: libbiojava-java-doc -Section: doc -Architecture: all -Depends: ${misc:Depends} -Recommends: konqueror|html-browser -Suggests: libbiojava-java-demos, libbiojava-java -Description: [Biology] Documentation for BioJava - BioJava is an open-source project dedicated to providing a Java framework - for processing biological data. - . - This package contains the HTML documentation describing the API of BioJava - which was generated automatically by JavaDoc. Copied: trunk/packages/biojava/tags/1:1.7.1-3/debian/control (from rev 14644, trunk/packages/biojava/branches/1.7.1/debian/control) =================================================================== --- trunk/packages/biojava/tags/1:1.7.1-3/debian/control (rev 0) +++ trunk/packages/biojava/tags/1:1.7.1-3/debian/control 2013-09-10 08:40:47 UTC (rev 14645) @@ -0,0 +1,82 @@ +Source: biojava-live +Section: java +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Steffen Moeller <[email protected]>, + Andreas Tille <[email protected]>, + Olivier Sallou <[email protected]> +Build-Depends-Indep: libcommons-dbcp-java (>= 1.1), libhsqldb-java, + libcommons-collections3-java (>= 2.1), libcommons-pool-java (>= 1.1), + libbytecode-java (>= 0.92.cvs.20070925), + default-jdk, junit4, + ant-optional +Build-Depends: debhelper (>= 9), cdbs, ant +Standards-Version: 3.9.4 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/biojava/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/biojava/trunk/ +Homepage: http://www.biojava.org + +Package: libbiojava1.7-java +Architecture: all +Depends: ${shlibs:Depends}, ${misc:Depends}, + libcommons-pool-java (>= 1.1), + libcommons-collections-java (>= 2.1), + libcommons-dbcp-java (>= 1.1), + libhsqldb-java, + libbytecode-java +Suggests: java-virtual-machine, libjgrapht-java, libbiojava-java, libbiojava-java-doc +Conflicts: libbiojava1.6-java +Replaces: libbiojava1.6-java +Description: Java API to biological data and applications (version 1.7) + This package presents the Open Source Java API to biological databases + and a series of mostly sequence-based algorithms. The APIs are not + compatible between versions. In analogy to the dealing with shared + libraries of the C language, the jar file of this package has the + API version in its name. It is symbolically linked to the expected + biojava.jar filename in the package libbiojava-java. This will help + keeping multiple versions of the biojava API in parallel. + +Package: libbiojava-java +Architecture: all +Depends: libbiojava1.7-java, ${misc:Depends} +Conflicts: libbiojava1.6-java +Replaces: libbiojava1.6-java +Description: Java API to biological data and applications (default version) + BioJava is an open-source project dedicated to providing a Java framework + for processing biological data. It includes objects for manipulating + sequences, file parsers, DAS client and server support, access to BioSQL + and Ensembl databases, and powerful analysis and statistical routines + including a dynamic programming toolkit. + . + BioJava is provided by a vibrant community which meets annually at + the Bioinformatics Open Source Conference (BOSC) that traditionally + accompanies the Intelligent Systems in Molecular Biology (ISMB) + meeting. Much like BioPerl, the employment of this library is valuable + for everybody active in the field because of the many tricks of the + trade one learns just by communicating on the mailing list. + . + This is a wrapper package which should enable smooth upgrades to new + versions. + +Package: libbiojava-java-demos +Architecture: all +Depends: ${misc:Depends} +Recommends: libbiojava-java +Description: Example programs for BioJava + The package comes with a wealth of use cases for BioJava. It is generated + together with the API documentation but because of its size of ~3.7MB it + was decided to distribute it separately. + + +Package: libbiojava-java-doc +Section: doc +Architecture: all +Depends: ${misc:Depends} +Recommends: konqueror|html-browser +Suggests: libbiojava-java-demos, libbiojava-java +Description: [Biology] Documentation for BioJava + BioJava is an open-source project dedicated to providing a Java framework + for processing biological data. + . + This package contains the HTML documentation describing the API of BioJava + which was generated automatically by JavaDoc. _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
