Author: moeller Date: 2013-09-10 17:04:43 +0000 (Tue, 10 Sep 2013) New Revision: 14646
Added: trunk/packages/profit/trunk/debian/profit-3d.dirs trunk/packages/profit/trunk/debian/profit-3d.install trunk/packages/profit/trunk/debian/profit.links Removed: trunk/packages/profit/trunk/debian/profit.dirs trunk/packages/profit/trunk/debian/profit.install Modified: trunk/packages/profit/trunk/debian/README.Debian trunk/packages/profit/trunk/debian/control trunk/packages/profit/trunk/debian/rules Log: EMBOSS conflicts with profit .. the letter being unredistributable and hence not in our distribution. Modified: trunk/packages/profit/trunk/debian/README.Debian =================================================================== --- trunk/packages/profit/trunk/debian/README.Debian 2013-09-10 08:40:47 UTC (rev 14645) +++ trunk/packages/profit/trunk/debian/README.Debian 2013-09-10 17:04:43 UTC (rev 14646) @@ -1,6 +1,9 @@ profit for Debian ----------------- +/usr/bin/profit sadly clashes with the emboss package, for a very +different funtion. + The license of ProFit does not allow a redistribution. The documentation is not built, since it demanded too much of LaTeX to be installed, Modified: trunk/packages/profit/trunk/debian/control =================================================================== --- trunk/packages/profit/trunk/debian/control 2013-09-10 08:40:47 UTC (rev 14645) +++ trunk/packages/profit/trunk/debian/control 2013-09-10 17:04:43 UTC (rev 14646) @@ -8,7 +8,7 @@ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/profit/trunk/ Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/profit/trunk/ -Package: profit +Package: profit-3d Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, profit-data Description: Protein structure alignment @@ -16,7 +16,23 @@ program. It has many features including flexible specification of fitting zones and atoms, calculation of RMS over different zones or atoms, RMS-by-residue calculation, on-line help facility, etc. + . + The binary is named profit-3D because of a name clash with an + EMBOSS tool. +Package: profit +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends}, profit-3d +Conflicts: emboss +Description: Protein structure alignment + ProFit is designed to be the ultimate protein least squares fitting + program. It has many features including flexible specification of + fitting zones and atoms, calculation of RMS over different zones or + atoms, RMS-by-residue calculation, on-line help facility, etc. + . + A symbolic link is provided to have the binary name back to how + it is historically correct. + Package: profit-data Architecture: all Recommends: profit Copied: trunk/packages/profit/trunk/debian/profit-3d.dirs (from rev 14634, trunk/packages/profit/trunk/debian/profit.dirs) =================================================================== --- trunk/packages/profit/trunk/debian/profit-3d.dirs (rev 0) +++ trunk/packages/profit/trunk/debian/profit-3d.dirs 2013-09-10 17:04:43 UTC (rev 14646) @@ -0,0 +1,2 @@ +usr/lib/profit +usr/bin Copied: trunk/packages/profit/trunk/debian/profit-3d.install (from rev 14634, trunk/packages/profit/trunk/debian/profit.install) =================================================================== --- trunk/packages/profit/trunk/debian/profit-3d.install (rev 0) +++ trunk/packages/profit/trunk/debian/profit-3d.install 2013-09-10 17:04:43 UTC (rev 14646) @@ -0,0 +1 @@ +src/profit usr/lib/profit/ Deleted: trunk/packages/profit/trunk/debian/profit.dirs =================================================================== --- trunk/packages/profit/trunk/debian/profit.dirs 2013-09-10 08:40:47 UTC (rev 14645) +++ trunk/packages/profit/trunk/debian/profit.dirs 2013-09-10 17:04:43 UTC (rev 14646) @@ -1,2 +0,0 @@ -usr/lib/profit -usr/bin Deleted: trunk/packages/profit/trunk/debian/profit.install =================================================================== --- trunk/packages/profit/trunk/debian/profit.install 2013-09-10 08:40:47 UTC (rev 14645) +++ trunk/packages/profit/trunk/debian/profit.install 2013-09-10 17:04:43 UTC (rev 14646) @@ -1,2 +0,0 @@ -src/profit usr/lib/profit/ -debian/bin/profit usr/bin/ Added: trunk/packages/profit/trunk/debian/profit.links =================================================================== --- trunk/packages/profit/trunk/debian/profit.links (rev 0) +++ trunk/packages/profit/trunk/debian/profit.links 2013-09-10 17:04:43 UTC (rev 14646) @@ -0,0 +1 @@ +usr/bin/profit-3D usr/bin/profit Modified: trunk/packages/profit/trunk/debian/rules =================================================================== --- trunk/packages/profit/trunk/debian/rules 2013-09-10 08:40:47 UTC (rev 14645) +++ trunk/packages/profit/trunk/debian/rules 2013-09-10 17:04:43 UTC (rev 14646) @@ -18,3 +18,7 @@ override_dh_auto_clean: $(MAKE) -C src clean +override_dh_install: + dh_install + cp $(CURDIR)/src/profit $(CURDIR)/debian/profit-3d/usr/bin/profit-3D + _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
