Author: osallou-guest Date: 2014-01-17 08:19:59 +0000 (Fri, 17 Jan 2014) New Revision: 15804
Modified: trunk/packages/logol/trunk/debian/patches/remove_rubygems_usage Log: fix provided patch with line endings Modified: trunk/packages/logol/trunk/debian/patches/remove_rubygems_usage =================================================================== --- trunk/packages/logol/trunk/debian/patches/remove_rubygems_usage 2014-01-17 08:14:12 UTC (rev 15803) +++ trunk/packages/logol/trunk/debian/patches/remove_rubygems_usage 2014-01-17 08:19:59 UTC (rev 15804) @@ -15,14 +15,14 @@ --- a/tools/logolSearch.rb +++ b/tools/logolSearch.rb @@ -22,9 +22,9 @@ - DIR=File.expand_path(File.dirname(__FILE__)) - - if muteOnly == 1 -- cmd = "ruby -rubygems "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError+" --hamming" -+ cmd = "ruby "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError+" --hamming" - else -- cmd = "ruby -rubygems "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError -+ cmd = "ruby "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError - end - - Open3.popen3(cmd) do |stdin,stdout,stderr, wait_thr| + DIR=File.expand_path(File.dirname(__FILE__)) + + if muteOnly == 1 +- cmd = "ruby -rubygems "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError+" --hamming" ++ cmd = "ruby "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError+" --hamming" + else +- cmd = "ruby -rubygems "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError ++ cmd = "ruby "+DIR+"/logolIndex.rb --search "+sequence+".index --min "+minStart+" --max "+maxStart+" --pattern "+motifFileName+" --error "+nbError + end + + Open3.popen3(cmd) do |stdin,stdout,stderr, wait_thr| _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
