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The "DebianMed/Meeting/Aberdeen2014" page has been changed by Luca Clivio: https://wiki.debian.org/DebianMed/Meeting/Aberdeen2014?action=diff&rev1=96&rev2=97 ||09:30||Talk about Qlustar, Tony Travis (Minke Informatics)|| ||10:00||Kristoffer speaks of possibilities of batch upload of package info into the tools registry|| ||10:30||Coffee break|| - ||11:00||Talk?|| + ||11:00||Talk about P2Pdb, Luca Clivio. A peer to peer approach to data sharing for clinical trials and translational research|| ||11:30||Talk?|| ||12:00||Talk?|| ||12:30||Talk?|| @@ -122, +122 @@ * note [Matus]: preliminary brainstorming on this topic has been done by László, Jon Ison, Matúš (+Steffen, Hervé, Bertrand, Kristoffer Rapacki. Notes connected to attributes to annotate are in this section of the [[https://docs.google.com/document/d/19VpzwxZdlz1K4P1q1a-WYZUtiSXwUp2nafM716dzW8I/edit?pli=1#bookmark=id.v415n1pdyfl0|CodefestOntoDoc]]) - Let's get more people on board and decide and make concrete steps in Stonehaven! * Development of bioinformatics tools registry and opportunities for synergy with Debian Med, Bio-Linux, Galaxy, Mobyle, ... [Kristoffer, Matúš] * Community development, licensing, and potentially packaging of "standards" (incl. ontologies, schemata, ...) - what are the good, sustainable ways? Interested: Matus - * p2pDB [Luca] - beyond the web: a peer to peer approach to data sharing for clinical trials and bioinformatics research + * p2pDB [Luca] - beyond the web: a peer to peer approach to data sharing for clinical trials and translational research * Bioinformatics education on the Raspberry Pi - [[http://eggg.st-andrews.ac.uk/4273pi|4273pi]] [Daniel] * Automated creation of [[http://www.docker.io/|Docker]] containers with specific combinations of Debian-Med and external packages using Cloud. Work in progress is [[https://github.com/chapmanb/bcbio-nextgen-vm|bcbio-nextgen-vm]], with a [[https://github.com/chapmanb/bcbio-nextgen/blob/master/Dockerfile|Dockerfile]]. [Brad] * [note O. Sallou] might be worth looking at/contributing to build-debian-cloud (python branch). It can be used for the moment to build EC2 or VirtualBox/Vagrant and KMV images. It also supports the addition of plugins. _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
