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commit 34d992b9c437c9426eab751aacdeb5572e99e04a Merge: 2569fee 8d67a5c Author: Andreas Tille <[email protected]> Date: Wed Mar 19 11:57:43 2014 +0100 Merge tag 'upstream/2.0.11+dfsg' Upstream version 2.0.11+dfsg src/SeqAn-1.3/COPYING | 674 ---- src/SeqAn-1.3/README | 22 - src/SeqAn-1.3/seqan.h | 61 - src/SeqAn-1.3/seqan/LICENSE | 26 - src/SeqAn-1.3/seqan/align.h | 79 - src/SeqAn-1.3/seqan/align/align_algorithms.h | 261 -- src/SeqAn-1.3/seqan/align/align_base.h | 656 ---- src/SeqAn-1.3/seqan/align/align_cols_base.h | 443 --- src/SeqAn-1.3/seqan/align/align_dynprog.h | 578 ---- .../seqan/align/align_generated_forwards.h | 1158 ------- src/SeqAn-1.3/seqan/align/align_hirschberg.h | 507 --- src/SeqAn-1.3/seqan/align/align_iterator_base.h | 556 ---- src/SeqAn-1.3/seqan/align/align_local_dynprog.h | 881 ----- .../seqan/align/align_local_dynprog_banded.h | 585 ---- src/SeqAn-1.3/seqan/align/align_myers.h | 1041 ------ src/SeqAn-1.3/seqan/align/align_trace.h | 424 --- src/SeqAn-1.3/seqan/align/gaps_array.h | 1184 ------- src/SeqAn-1.3/seqan/align/gaps_base.h | 1335 -------- src/SeqAn-1.3/seqan/align/gaps_iterator_base.h | 323 -- src/SeqAn-1.3/seqan/align/gaps_sumlist.h | 938 ------ src/SeqAn-1.3/seqan/align/hirschberg_set.h | 223 -- src/SeqAn-1.3/seqan/align/matrix_base.h | 1106 ------- src/SeqAn-1.3/seqan/basic.h | 142 - 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src/SeqAn-1.3/seqan/store/store_matepair.h | 112 - src/SeqAn-1.3/seqan/store/store_read.h | 101 - src/SeqAn-1.3/seqan/system.h | 93 - src/SeqAn-1.3/seqan/system/file_async.h | 1035 ------ src/SeqAn-1.3/seqan/system/file_directory.h | 284 -- src/SeqAn-1.3/seqan/system/file_manual_forwards.h | 160 - src/SeqAn-1.3/seqan/system/file_sync.h | 421 --- src/SeqAn-1.3/seqan/system/system_base.h | 65 - src/SeqAn-1.3/seqan/system/system_event.h | 315 -- .../seqan/system/system_generated_forwards.h | 55 - .../seqan/system/system_manual_forwards.h | 124 - src/SeqAn-1.3/seqan/system/system_mutex.h | 183 -- src/SeqAn-1.3/seqan/system/system_sema.h | 149 - src/SeqAn-1.3/seqan/system/system_thread.h | 215 -- 508 files changed, 256841 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/tophat.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
