This is an automated email from the git hooks/post-receive script. plessy pushed a commit to branch master in repository picard-tools.
commit 9cfa9d8a64d1617107d454bc7544e0fae70dd7b5 Merge: e3eeb80 514b7eb Author: Charles Plessy <[email protected]> Date: Sat Mar 22 10:44:07 2014 +0900 Merge tag 'upstream/1.107' Upstream version 1.107 # gpg: Signature faite le sam. 22 mars 2014 10:44:07 JST avec la clef RSA d'identifiant 2295D502 # gpg: Bonne signature de « Charles Plessy <[email protected]> » build.xml | 13 ++++++--- .../picard/illumina/parser/readers/BclReader.java | 3 +- src/java/net/sf/picard/sam/SamFormatConverter.java | 2 +- src/java/net/sf/picard/util/MathUtil.java | 16 +++++++++-- src/java/net/sf/picard/util/SamLocusIterator.java | 4 +++ src/java/net/sf/samtools/util/TestUtil.java | 19 +++++++++---- .../writer/VariantContextWriterFactory.java | 29 +++++++++++++++---- .../variant/vcf/AbstractVCFCodec.java | 4 +-- .../org/broadinstitute/variant/vcf/VCFCodec.java | 4 +-- .../variant/vcf/VCFCompoundHeaderLine.java | 6 ++-- .../variant/vcf/VCFHeaderLineTranslator.java | 1 + .../variant/vcf/VCFHeaderVersion.java | 24 +++++++++++++++- .../net/sf/picard/vcf/VcfFormatConverterTest.java | 33 ++++++++++++++-------- .../variantcontext/writer/VCFWriterUnitTest.java | 2 +- 14 files changed, 119 insertions(+), 41 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/picard-tools.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
