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lckarssen-guest pushed a change to branch master
in repository probabel.
from 646f05f Move debian/upstream to debian/upstream/metadata
new c35814e Imported Upstream version 0.4.2
new e9ad568 Imported Upstream version 0.4.3
new 6a5e79a Fixed conflicts from upload of upstream version 0.4.3.
new a02e058 Updated d/changelog to reflect new upstream release.
new a9e460a Added TeXlive fonts package needed for building the
manual to d/control.
The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
checks/R-tests/Makefile.am | 5 +
checks/R-tests/Makefile.in | 3 +-
checks/R-tests/run_models_in_R_pacox.R | 5 +-
checks/run_diff.sh | 2 +-
configure | 20 +--
configure.ac | 4 +-
debian/changelog | 7 +
debian/control | 1 +
doc/ChangeLog | 12 +-
doc/INSTALL | 3 +
doc/ProbABEL_manual.tex | 225 +++++++++++++++++++++++++++++----
doc/pacoxph.1 | 2 +-
doc/palinear.1 | 2 +-
doc/palogist.1 | 2 +-
doc/probabel.1 | 2 +-
doc/probabel.pl.1 | 2 +-
src/command_line_settings.cpp | 21 +++
src/command_line_settings.h | 21 +++
src/coxph_data.cpp | 22 ++++
src/coxph_data.h | 21 +++
src/data.cpp | 23 ++++
src/data.h | 21 +++
src/eigen_mematrix.cpp | 32 ++++-
src/eigen_mematrix.h | 23 ++++
src/gendata.cpp | 39 +++++-
src/gendata.h | 21 +++
src/main.cpp | 24 ++++
src/main_functions_dump.cpp | 20 +++
src/main_functions_dump.h | 21 +++
src/maskedmatrix.cpp | 21 +++
src/maskedmatrix.h | 21 +++
src/mematri1.h | 23 ++++
src/mematrix.h | 23 ++++
src/phedata.cpp | 23 ++++
src/phedata.h | 21 +++
src/reg1.cpp | 34 ++++-
src/reg1.h | 24 ++++
src/regdata.cpp | 22 ++++
src/regdata.h | 21 +++
src/usage.cpp | 27 +++-
src/usage.h | 21 +++
src/utilities.cpp | 22 ++++
src/utilities.h | 21 +++
43 files changed, 865 insertions(+), 65 deletions(-)
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