Author: osallou
Date: 2014-04-08 13:53:02 +0000 (Tue, 08 Apr 2014)
New Revision: 16603
Added:
trunk/packages/cassiopee/trunk/debian/
trunk/packages/cassiopee/trunk/debian/cassiopee-doc.docs
trunk/packages/cassiopee/trunk/debian/cassiopee-doc.install
trunk/packages/cassiopee/trunk/debian/cassiopee.install
trunk/packages/cassiopee/trunk/debian/changelog
trunk/packages/cassiopee/trunk/debian/compat
trunk/packages/cassiopee/trunk/debian/control
trunk/packages/cassiopee/trunk/debian/copyright
trunk/packages/cassiopee/trunk/debian/docs
trunk/packages/cassiopee/trunk/debian/libcassiopee-dev.install
trunk/packages/cassiopee/trunk/debian/libcassiopee.install
trunk/packages/cassiopee/trunk/debian/rules
trunk/packages/cassiopee/trunk/debian/source/
trunk/packages/cassiopee/trunk/debian/source/format
trunk/packages/cassiopee/trunk/debian/watch
Log:
[svn-inject] Applying Debian modifications (1.0-1) to trunk
Property changes on: trunk/packages/cassiopee/trunk/debian
___________________________________________________________________
Added: mergeWithUpstream
+ 1
Added: trunk/packages/cassiopee/trunk/debian/cassiopee-doc.docs
===================================================================
--- trunk/packages/cassiopee/trunk/debian/cassiopee-doc.docs
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/cassiopee-doc.docs 2014-04-08
13:53:02 UTC (rev 16603)
@@ -0,0 +1 @@
+#DOCS#
Added: trunk/packages/cassiopee/trunk/debian/cassiopee-doc.install
===================================================================
--- trunk/packages/cassiopee/trunk/debian/cassiopee-doc.install
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/cassiopee-doc.install 2014-04-08
13:53:02 UTC (rev 16603)
@@ -0,0 +1,2 @@
+#DOCS#
+doc/html usr/share/doc/cassiopee
Added: trunk/packages/cassiopee/trunk/debian/cassiopee.install
===================================================================
--- trunk/packages/cassiopee/trunk/debian/cassiopee.install
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/cassiopee.install 2014-04-08
13:53:02 UTC (rev 16603)
@@ -0,0 +1,2 @@
+debian/tmp/usr/bin/cassiopee usr/bin
+debian/tmp/usr/bin/cassiopeeknife usr/bin
Added: trunk/packages/cassiopee/trunk/debian/changelog
===================================================================
--- trunk/packages/cassiopee/trunk/debian/changelog
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/changelog 2014-04-08 13:53:02 UTC
(rev 16603)
@@ -0,0 +1,5 @@
+cassiopee (1.0-1) unstable; urgency=low
+
+ * Initial release (Closes: #nnnn) <nnnn is the bug number of your ITP>
+
+ -- Olivier Sallou <[email protected]> Tue, 08 Apr 2014 12:59:31 +0200
Added: trunk/packages/cassiopee/trunk/debian/compat
===================================================================
--- trunk/packages/cassiopee/trunk/debian/compat
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/compat 2014-04-08 13:53:02 UTC
(rev 16603)
@@ -0,0 +1 @@
+9
Added: trunk/packages/cassiopee/trunk/debian/control
===================================================================
--- trunk/packages/cassiopee/trunk/debian/control
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/control 2014-04-08 13:53:02 UTC
(rev 16603)
@@ -0,0 +1,50 @@
+Source: cassiopee
+Section: science
+Priority: optional
+Maintainer: Olivier Sallou <[email protected]>
+Build-Depends: debhelper (>= 8.0.0),
+ libboost-serialization-dev,libboost-iostreams-dev,
+ google-glog, cppunit
+Standards-Version: 3.9.4
+Homepage: https://github.com/osallou/cassiopee-c
+Vcs-Browser:
http://anonscm.debian.org/viewvc/debian-med/trunk/packages/cassiopee/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/cassiopee/trunk/
+
+
+Package: cassiopee
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}, libcassiopee
+Description: index and search tool in genomic sequences
+ Cassiopee index and search library C implementation.
+ It is a complete rewrite of the ruby Cassiopee gem. It scans an input
+ genomic sequence (dna/rna/protein) and search for a subsequence with
+ exact match or allowing substitutions (Hamming distance) and/or
+ insertion/deletions.
+
+Package: cassiopee-doc
+Architecture: all
+Description: documentation for cassiopee
+ Doxygen generated documentation for the cassiopee library.
+
+Package: libcassiopee
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends},
+ libboost-serialization,libboost-iostreams,
+ google-glog
+Description: library implementating search algorithms
+ Cassiopee index and search library C implementation.
+ It is a complete rewrite of the ruby Cassiopee gem. It scans an input
+ genomic sequence (dna/rna/protein) and search for a subsequence with
+ exact match or allowing substitutions (Hamming distance) and/or
+ insertion/deletions.
+
+Package: libcassiopee-dev
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: library and headers for development
+ Cassiopee index and search library C implementation.
+ It is a complete rewrite of the ruby Cassiopee gem. It scans an input
+ genomic sequence (dna/rna/protein) and search for a subsequence with
+ exact match or allowing substitutions (Hamming distance) and/or
+ insertion/deletions.
+
Added: trunk/packages/cassiopee/trunk/debian/copyright
===================================================================
--- trunk/packages/cassiopee/trunk/debian/copyright
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/copyright 2014-04-08 13:53:02 UTC
(rev 16603)
@@ -0,0 +1,38 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: cassiopee
+Source: <url://example.com>
+
+Files: *
+Copyright: <years> <put author's name and email here>
+ <years> <likewise for another author>
+License: <special license>
+ <Put the license of the package here indented by 1 space>
+ <This follows the format of Description: lines in control file>
+ .
+ <Including paragraphs>
+
+# If you want to use GPL v2 or later for the /debian/* files use
+# the following clauses, or change it to suit. Delete these two lines
+Files: debian/*
+Copyright: 2014 Olivier Sallou <[email protected]>
+License: GPL-2+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+
+# Please also look if there are files or directories which have a
+# different copyright/license attached and list them here.
+# Please avoid to pick license terms that are more restrictive than the
+# packaged work, as it may make Debian's contributions unacceptable upstream.
Added: trunk/packages/cassiopee/trunk/debian/docs
===================================================================
Added: trunk/packages/cassiopee/trunk/debian/libcassiopee-dev.install
===================================================================
--- trunk/packages/cassiopee/trunk/debian/libcassiopee-dev.install
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/libcassiopee-dev.install
2014-04-08 13:53:02 UTC (rev 16603)
@@ -0,0 +1,2 @@
+debian/tmp/usr/lib/libcassie.so usr/lib
+debian/tmp/usr/include usr/include
Added: trunk/packages/cassiopee/trunk/debian/libcassiopee.install
===================================================================
--- trunk/packages/cassiopee/trunk/debian/libcassiopee.install
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/libcassiopee.install 2014-04-08
13:53:02 UTC (rev 16603)
@@ -0,0 +1,2 @@
+debian/tmp/usr/lib/libcassie.so.1 usr/lib
+debian/tmp/usr/lib/libcassie.so.1.0.0 usr/lib
Added: trunk/packages/cassiopee/trunk/debian/rules
===================================================================
--- trunk/packages/cassiopee/trunk/debian/rules (rev 0)
+++ trunk/packages/cassiopee/trunk/debian/rules 2014-04-08 13:53:02 UTC (rev
16603)
@@ -0,0 +1,17 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+# This has to be exported to make some magic below work.
+export DH_OPTIONS
+
+#include /usr/share/cdbs/1/class/cmake.mk
+
+%:
+ dh $@
+
+override_dh_clean:
+ dh_clean
+ rm -rf doc
Property changes on: trunk/packages/cassiopee/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/cassiopee/trunk/debian/source/format
===================================================================
--- trunk/packages/cassiopee/trunk/debian/source/format
(rev 0)
+++ trunk/packages/cassiopee/trunk/debian/source/format 2014-04-08 13:53:02 UTC
(rev 16603)
@@ -0,0 +1 @@
+3.0 (quilt)
Added: trunk/packages/cassiopee/trunk/debian/watch
===================================================================
--- trunk/packages/cassiopee/trunk/debian/watch (rev 0)
+++ trunk/packages/cassiopee/trunk/debian/watch 2014-04-08 13:53:02 UTC (rev
16603)
@@ -0,0 +1,5 @@
+# Compulsory line, this is a version 3 file
+version=3
+
+opts=filenamemangle=s/.+\/v?(\d\S*)\.tar\.gz/cassiopee-$1\.tar\.gz/ \
+ https://github.com/osallou/cassiopee-c/tags .*/v?(\d\S*)\.tar\.gz
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