This is an automated email from the git hooks/post-receive script.
malex-guest pushed a change to branch master
in repository bowtie2.
from fc494ca UNRELEASED->unstable
new 89ac339 Imported Upstream version 2.2.1
new c4f2041 Merge tag 'upstream/2.2.1'
new f27a14e d/changelog: new upstream version, push to unstable
d/copyright: updated Copyright years
new 2eb8a65 Imported Upstream version 2.2.2
new 9f72f42 Merge tag 'upstream/2.2.2'
new a07c983 d/changelog: Imported Upstream version 2.2.2, upload to
unstable
The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
MANUAL | 29 ++++++++++++--------
MANUAL.markdown | 37 ++++++++++++++++---------
NEWS | 22 ++++++++++++---
VERSION | 2 +-
bowtie2 | 17 +++++++-----
bt2_idx.h | 12 ++++-----
bt2_io.cpp | 82 +++++++++++++++++++-------------------------------------
bt2_search.cpp | 6 +++--
debian/changelog | 13 +++++++++
debian/copyright | 4 +--
doc/manual.html | 14 +++++++---
mm.h | 15 -----------
ref_read.h | 13 ---------
reference.cpp | 67 ++++++++++++++++++++++++---------------------
reference.h | 9 ++++---
word_io.h | 72 -------------------------------------------------
16 files changed, 180 insertions(+), 234 deletions(-)
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