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malex-guest pushed a change to branch master
in repository cufflinks.
from 25fe711 d/copyright: UNRELEASED->unstable d/control: fixed
VCS-Browser field d/rules: fixed description for man pages
new d68919a d/control: cme fix dpkg-control
new 55fd328 Imported Upstream version 2.2.1
new 52933e8 Merge tag 'upstream/2.2.1'
new 6e5767c d/changelog: imported new upstream release upload to
unstable
The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.in | 10 +-
config.h.in | 2 +-
configure | 8583 ++++++++++++++++++++++++++++----------------------
configure.ac | 2 +-
debian/changelog | 7 +
debian/control | 16 +-
make_bin.sh | 6 +-
src/GBase.cpp | 8 +-
src/GFaSeqGet.h | 24 +
src/GStr.cpp | 29 +-
src/GStr.h | 20 +-
src/Makefile.in | 10 +-
src/abundances.cpp | 10 +-
src/common.cpp | 6 +-
src/common.h | 1 +
src/cuffdiff.cpp | 58 +-
src/cuffnorm.cpp | 113 +-
src/cuffquant.cpp | 2 +-
src/gff.cpp | 25 +-
src/gff.h | 12 +-
src/gff_utils.cpp | 14 +-
src/gtf_tracking.cpp | 112 +-
src/gtf_tracking.h | 17 +-
src/replicates.cpp | 4 +
24 files changed, 5169 insertions(+), 3922 deletions(-)
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