This is an automated email from the git hooks/post-receive script. diane-guest pushed a commit to branch master in repository python-htseq.
commit ae4a1b4daf2181881d9f015a49cf6c83bb32efcf Merge: 3a7e70e 36c4d8d Author: Diane Trout <di...@ghic.org> Date: Thu Jun 5 17:16:27 2014 -0700 Merge tag 'upstream/0.6.1p1' Upstream version 0.6.1p1 HTSeq/__init__.py | 173 +- HTSeq/_version.py | 1 - HTSeq/scripts/count.py | 135 +- PKG-INFO | 19 - VERSION | 2 +- doc/GenomicArrayOfSets.svg | 309 + doc/alignments.rst | 32 +- doc/cigar.png | Bin 0 -> 13104 bytes doc/count.rst | 184 +- doc/counting.rst | 303 + doc/features.rst | 106 - doc/genomic.rst | 2 +- doc/history.rst | 47 +- doc/index.rst | 2 + doc/install.rst | 2 +- doc/make_it | 3 - doc/otherparsers.rst | 173 + doc/overview.rst | 20 + doc/tour.rst | 222 +- example_data/Homo_sapiens.GRCh37.56_chrom1.gtf | 197895 ++++++++++++++++++ example_data/SRR001432_head.bam | Bin 0 -> 12849262 bytes example_data/SRR001432_head_sorted.bam | Bin 0 -> 11925267 bytes example_data/SRR001432_head_sorted.bam.bai | Bin 0 -> 2873888 bytes .../Saccharomyces_cerevisiae.SGD1.01.56.gtf.gz | Bin 0 -> 373439 bytes example_data/fastaEx.fa | 6 + example_data/feature_list.txt | 3 + example_data/yeast_RNASeq_excerpt.sam | 25019 +++ example_data/yeast_RNASeq_excerpt_sequence.txt | 99996 +++++++++ setup.cfg | 5 - setup.py | 2 +- src/HTSeq/_HTSeq.pyx | 45 +- test/test.py | 36 + test/tss_test.py | 35 + todo.txt | 8 + 34 files changed, 324412 insertions(+), 373 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-htseq.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit