This is an automated email from the git hooks/post-receive script. bob.dybian-guest pushed a commit to branch master in repository r-cran-ape.
commit bc9fbeb23c4f94d41c2690612718e62f1b0c9731 Merge: e1e2c07 2685aff Author: Dylan Aïssi <[email protected]> Date: Mon Dec 8 19:09:18 2014 +0100 Merge tag 'upstream/3.2' Upstream version 3.2 DESCRIPTION | 18 ++-- MD5 | 70 +++++++------ NAMESPACE | 4 + R/DNA.R | 27 ++++- R/ace.R | 2 +- R/def.R | 23 +++++ R/dist.topo.R | 1 - R/is.ultrametric.R | 2 +- R/multi2di.R | 16 +-- R/nodepath.R | 60 ++++++++++++ R/phymltest.R | 4 +- R/plot.phylo.R | 4 +- R/read.nexus.R | 8 +- R/read.tree.R | 2 +- R/reconstruct.R | 240 +++++++++++++++++++++++++++++++++++++++++++++ R/rtt.R | 6 +- R/scales.R | 42 ++++---- R/vcv.phylo.R | 2 +- R/vcv2phylo.R | 135 +++++++++++++++++++++++++ R/write.nexus.data.R | 176 ++++++++++++++------------------- build/vignette.rds | Bin 192 -> 194 bytes data/hivtree.newick.rda | Bin 2189 -> 2190 bytes data/landplants.newick.rda | Bin 575 -> 576 bytes data/opsin.newick.rda | Bin 445 -> 446 bytes inst/doc/MoranI.pdf | Bin 256526 -> 237986 bytes man/all.equal.phylo.Rd | 4 +- man/ape-internal.Rd | 6 ++ man/as.alignment.Rd | 32 +++++- man/axisPhylo.Rd | 8 +- man/compar.lynch.Rd | 2 +- man/corClasses.Rd | 3 +- man/def.Rd | 63 ++++++++++++ man/diversi.gof.Rd | 6 +- man/mst.Rd | 2 +- man/nodepath.Rd | 31 ++++++ man/plot.phylo.Rd | 1 + man/reconstruct.Rd | 81 +++++++++++++++ man/vcv.phylo.Rd | 2 +- man/vcv2phylo.Rd | 35 +++++++ man/write.nexus.data.Rd | 29 +++--- 40 files changed, 934 insertions(+), 213 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-cran-ape.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
