Author: bob.dybian-guest Date: 2015-01-11 10:22:04 +0000 (Sun, 11 Jan 2015) New Revision: 18564
Modified: trunk/packages/plink/trunk/debian/examples trunk/packages/plink/trunk/debian/tests/run-sample-analysis Log: Fixed autopkgtest Modified: trunk/packages/plink/trunk/debian/examples =================================================================== --- trunk/packages/plink/trunk/debian/examples 2015-01-11 10:17:13 UTC (rev 18563) +++ trunk/packages/plink/trunk/debian/examples 2015-01-11 10:22:04 UTC (rev 18564) @@ -3,4 +3,4 @@ test.map # Expected outputs for autopkgtest -debian/output_tests +debian/output_tests/* Modified: trunk/packages/plink/trunk/debian/tests/run-sample-analysis =================================================================== --- trunk/packages/plink/trunk/debian/tests/run-sample-analysis 2015-01-11 10:17:13 UTC (rev 18563) +++ trunk/packages/plink/trunk/debian/tests/run-sample-analysis 2015-01-11 10:22:04 UTC (rev 18564) @@ -2,21 +2,23 @@ # http://dep.debian.net/deps/dep8/ # Autopkgtest: Test if plink run analysis correctly # Author: Dylan Aïssi <[email protected]> -# Last-Update: 2015-01-10 +# Last-Update: 2015-01-11 pkg=plink if [ "$ADTTMP" = "" ] ; then ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` fi cd $ADTTMP -cp -a /usr/share/doc/${pkg}/examples/output_tests/* $ADTTMP +cp -a /usr/share/doc/${pkg}/examples/* $ADTTMP +PLINK_TEST='plink --noweb --file test' + # Allele frequencies -plink --noweb --file test --freq +$PLINK_TEST --freq diff plink.frq expected.plink.frq # Case/control or QTL association -plink --noweb --file test --assoc +$PLINK_TEST --assoc diff plink.assoc expected.plink.assoc rm -f $ADTTMP/* _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
