This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository screed.
commit fa3b3fa1cc41ac077ec96ab81d65e7c5706e33a3 Author: Michael R. Crusoe <[email protected]> Date: Tue Jan 27 17:55:48 2015 -0500 initial debianization --- debian/changelog | 11 +++++++++++ debian/compat | 1 + debian/control | 21 +++++++++++++++++++++ debian/copyright | 37 +++++++++++++++++++++++++++++++++++++ debian/patches/add-nose-dep | 35 +++++++++++++++++++++++++++++++++++ debian/patches/series | 1 + debian/rules | 9 +++++++++ debian/source/format | 1 + debian/upstream/metadata | 7 +++++++ debian/watch | 3 +++ 10 files changed, 126 insertions(+) diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..f190520 --- /dev/null +++ b/debian/changelog @@ -0,0 +1,11 @@ +screed (0.7.1-2) UNRELEASED; urgency=medium + + * Packaging update + + -- Michael R. Crusoe <[email protected]> Tue, 27 Jan 2015 17:16:04 -0500 + +screed (0.7.1-1ubuntu1) trusty; urgency=medium + + * Initial Release. + + -- Michael R. Crusoe <[email protected]> Thu, 25 Sep 2014 02:02:57 -0400 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..f3f5220 --- /dev/null +++ b/debian/control @@ -0,0 +1,21 @@ +Source: screed +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Michael R. Crusoe <[email protected]> +Build-Depends: debhelper (>= 9.0.0), dh-python, python (>= 2.4) | python-all | python-dev | python-all-dev, python-sphinx, python-setuptools, python-nose +Standards-Version: 3.9.5 +Section: libs +Homepage: https://screed.readthedocs.org +Vcs-Git: git://anonscm.debian.org/debian-med/khmer.git +Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/khmer.git +X-Python-Version: >= 2.4 +Testsuite: autopkgtest + +Package: python-screed +Section: python +Architecture: any +Depends: ${misc:Depends}, ${sphinxdoc:Depends} +Description: short nucleotide read sequence utils in Python. + Screed parses FASTA and FASTQ files, generates databases, and lets you query + these databases. Values such as sequence name, sequence description, sequence + quality, and the sequence itself can be retrieved from these databases. diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..b07bc20 --- /dev/null +++ b/debian/copyright @@ -0,0 +1,37 @@ +Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: screed +Source: https://pypi.python.org/pypi/screed +Files-Excluded: screed.egg-info/* + +Files: * +Copyright: 2008-2014 Michigan State University +License: BSD-3-Clause + +Files: debian/* +Copyright: 2015 Michigan State University <[email protected]> +License: BSD-3-Clause + +License: BSD-3-Clause + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions + are met: + 1. Redistributions of source code must retain the above copyright + notice, this list of conditions and the following disclaimer. + 2. Redistributions in binary form must reproduce the above copyright + notice, this list of conditions and the following disclaimer in the + documentation and/or other materials provided with the distribution. + 3. Neither the name of the University nor the names of its contributors + may be used to endorse or promote products derived from this software + without specific prior written permission. + . + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS + ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT + LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR + A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE HOLDERS OR + CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, + EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, + PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR + PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF + LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING + NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS + SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. diff --git a/debian/patches/add-nose-dep b/debian/patches/add-nose-dep new file mode 100644 index 0000000..ce0eebe --- /dev/null +++ b/debian/patches/add-nose-dep @@ -0,0 +1,35 @@ +Description: <short summary of the patch> + TODO: Put a short summary on the line above and replace this paragraph + with a longer explanation of this change. Complete the meta-information + with other relevant fields (see below for details). To make it easier, the + information below has been extracted from the changelog. Adjust it or drop + it. + . + screed (0.7.1-1) trusty; urgency=low + . + * Initial Release. +Author: Michael R. Crusoe <[email protected]> + +--- +The information above should follow the Patch Tagging Guidelines, please +checkout http://dep.debian.net/deps/dep3/ to learn about the format. Here +are templates for supplementary fields that you might want to add: + +Origin: <vendor|upstream|other>, <url of original patch> +Bug: <url in upstream bugtracker> +Bug-Debian: http://bugs.debian.org/<bugnumber> +Bug-Ubuntu: https://launchpad.net/bugs/<bugnumber> +Forwarded: <no|not-needed|url proving that it has been forwarded> +Reviewed-By: <name and email of someone who approved the patch> +Last-Update: <YYYY-MM-DD> + +--- screed-0.7.1.orig/setup.py ++++ screed-0.7.1/setup.py +@@ -14,5 +14,6 @@ setup(name='screed', + packages=['screed', 'screed.tests'], + package_data={'screed.tests': ['test.*', 'test-whitespace.fa']}, + license='BSD', +- test_suite = 'nose.collector' ++ test_suite='nose.collector', ++ extras_require={'tests': ['nose >= 1.0']}, + ) diff --git a/debian/patches/series b/debian/patches/series new file mode 100644 index 0000000..ab387ce --- /dev/null +++ b/debian/patches/series @@ -0,0 +1 @@ +add-nose-dep diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..f0edf9b --- /dev/null +++ b/debian/rules @@ -0,0 +1,9 @@ +#!/usr/bin/make -f +# -*- makefile -*- + +# Uncomment this to turn on verbose mode. +#export DH_VERBOSE=1 +export PYBUILD_NAME=screed + +%: + dh $@ --with python2,sphinxdoc --buildsystem=pybuild diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/upstream/metadata b/debian/upstream/metadata new file mode 100644 index 0000000..f92ae42 --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,7 @@ +Bug-Database: https://github.com/ged-lab/khmer/issues?q=is%3Aopen+is%3Aissue+label%3Ascreed +Bug-Submit: https://github.com/ged-lab/khmer/issues/new?title=[Screed] +Changelog: https://raw.githubusercontent.com/ged-lab/screed/master/ChangeLog +Contact: [email protected] +Name: screed +Repository: https://github.com/ged-lab/screed.git +Repository-Browse: https://github.com/ged-lab/screed/ diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..fba3c9c --- /dev/null +++ b/debian/watch @@ -0,0 +1,3 @@ +version=3 +opts=uversionmangle=s/(rc|dev|a|b|c)/~$1/ \ +https://pypi.python.org/packages/source/s/screed/screed-(.*)\.(?:tar\.gz|zip|tar\.bz2) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/screed.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
