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commit 77f6dee147f6e778da5efcdfd3e9d2092efaf050 Merge: 4ab9d28 877e0f4 Author: Alexandre Mestiashvili <[email protected]> Date: Fri Mar 20 11:55:07 2015 +0100 Merge tag 'upstream/2014-12-25' Upstream version 2014-12-25 ChangeLog | 11 ++ VERSION | 2 +- configure | 24 +-- debian/changelog | 6 + src/samprint.c | 86 +++++----- src/stage3hr.c | 472 ++++++++++++++++++++++++++++++++++++------------------- src/stage3hr.h | 7 +- src/substring.c | 10 +- src/substring.h | 6 +- 9 files changed, 401 insertions(+), 223 deletions(-) diff --cc debian/changelog index acb3a3a,0000000..03ccfbf mode 100644,000000..100644 --- a/debian/changelog +++ b/debian/changelog @@@ -1,185 -1,0 +1,191 @@@ ++gmap (2014-12-25-1) UNRELEASED; urgency=medium ++ ++ * Imported Upstream version 2014-12-25 ++ ++ -- Alexandre Mestiashvili <[email protected]> Fri, 20 Mar 2015 11:56:19 +0100 ++ +gmap (2014-12-24-2) experimental; urgency=medium + + * add --disable-simd when compiled for i386 + * d/patches: drop patch disabling tests for i386 + + -- Alexandre Mestiashvili <[email protected]> Thu, 19 Mar 2015 18:37:54 +0100 + +gmap (2014-12-24-1) experimental; urgency=medium + + * Imported Upstream version 2014-12-24 + + -- Alexandre Mestiashvili <[email protected]> Fri, 13 Mar 2015 10:56:23 +0100 + +gmap (2014-12-23-1) UNRELEASED; urgency=medium + + * Imported Upstream version 2014-12-23 + * d/*.1: updated man pages + * d/rules: applied patch from Graham Inggs <[email protected]>, + Closes: #779564. + + -- Alexandre Mestiashvili <[email protected]> Thu, 12 Mar 2015 17:01:57 +0100 + +gmap (2014-11-25-1) UNRELEASED; urgency=medium + + * Imported Upstream version 2014-11-25 + * d/copyright: add missing information for config/* directory + + -- Alexandre Mestiashvili <[email protected]> Wed, 26 Nov 2014 10:22:52 +0100 + +gmap (2014-10-22-1) unstable; urgency=medium + + [ Alexandre Mestiashvili ] + * build fails due to 2 failing test on i386 for 2014-10-14 + + [ Andreas Tille ] + * Imported Upstream version 2014-10-22 + + [ Alexandre Mestiashvili ] + * debian/*.1: updated dates in man pages + * d/patches/drop_tests_i386.patch: do not run tests on i386 because they fail. + As it is not clear if the program is useful on i386 architecure, + let's leave it like that for now. + * d/README.Debian: note that embeded tests are skipped for i386 + + -- Andreas Tille <[email protected]> Sun, 26 Oct 2014 08:20:42 +0100 + +gmap (2014-10-09-1) unstable; urgency=medium + + * New upstream version + * cme fix dpkg-control + * DEP5 fix + + -- Andreas Tille <[email protected]> Sat, 11 Oct 2014 08:17:29 +0200 + +gmap (2014-07-28-1) unstable; urgency=medium + + * Imported Upstream version 2014-07-28 + + -- Alexandre Mestiashvili <[email protected]> Wed, 30 Jul 2014 09:55:12 +0200 + +gmap (2014-07-04-1) unstable; urgency=medium + + * New upstream release + + -- Alexandre Mestiashvili <[email protected]> Fri, 04 Jul 2014 10:49:40 +0200 + +gmap (2014-06-10-1) UNRELEASED; urgency=medium + + * New upstream release + * debian/patches/install-data-local: refreshed + * d/control: use canonical Vcs fields + - updated Standards-Version + - added help2man to Build-Depends: + - remove trailing slash from Homepage + - added myself to Uploaders: + * d/rules: install symlinks for gmap,gsnap and gmap_build in /usr/bin + - use as bindir /usr/lib/gmap + * d/install: removed as all files are installed in /usr/lib/gmap + * d/copyright: + - refresh copyright, add not mentioned before files + - add Comment that code was influenced by another software + * debian/*.1: updated man pages + * d/docs: install NOTICE + + -- Alexandre Mestiashvili <[email protected]> Fri, 04 Jul 2014 09:59:32 +0200 + +gmap (2013-07-20-1) unstable; urgency=low + + * New upstream version + * debian/control: + - cme fix dpkg-control + - debhelper 9 + + -- Andreas Tille <[email protected]> Fri, 02 Aug 2013 15:09:36 +0200 + +gmap (2012-06-12-1) unstable; urgency=low + + * New upstream release + + -- Shaun Jackman <[email protected]> Tue, 12 Jun 2012 15:06:22 -0700 + +gmap (2012-03-23-1) UNRELEASED; urgency=low + + * New upstream release + * debian/control: + - Added myself to Uploaders + - Standards-Version: 3.9.3 (no changes needed) + * debhelper 8 (control+compat) + * debian/upstream: Add citation information + * debian/copyright: Fixed some DEP5 issues and verified using + cme fix dpkg-copyright + * debian/install: gsnap_tally is not builded any more in this version + * debian/rules: really use autotools-dev to enable building twice in + a row + + -- Andreas Tille <[email protected]> Sun, 01 Apr 2012 09:53:26 +0200 + +gmap (2011-12-28-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Thu, 29 Dec 2011 12:32:19 -0800 + +gmap (2011-11-30-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Wed, 07 Dec 2011 10:46:12 -0800 + +gmap (2011-10-16-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Wed, 19 Oct 2011 15:40:36 -0700 + +gmap (2011-09-14-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Thu, 15 Sep 2011 14:36:34 -0700 + +gmap (2011-09-09-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Wed, 14 Sep 2011 17:09:21 -0700 + +gmap (2011-08-15-1) unstable; urgency=low + + * New upstream release. + * Bump Standards-Version to 3.9.2. + + -- Shaun Jackman <[email protected]> Tue, 23 Aug 2011 10:45:46 -0700 + +gmap (2011-03-11-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Wed, 23 Mar 2011 10:16:38 -0700 + +gmap (2010-07-27-1) unstable; urgency=low + + * New upstream release. + * Bump Standards-Version to 3.9.1. + + -- Shaun Jackman <[email protected]> Fri, 06 Aug 2010 10:12:23 -0700 + +gmap (2010-07-21-1) unstable; urgency=low + + * New upstream release. + + -- Shaun Jackman <[email protected]> Thu, 22 Jul 2010 11:36:34 -0700 + +gmap (2010-07-20-1) unstable; urgency=low + + * New upstream release. + * Bump Standards-Version to 3.9.0. + + -- Shaun Jackman <[email protected]> Wed, 21 Jul 2010 11:07:28 -0700 + +gmap (2010-03-09-1) unstable; urgency=low + + * Initial release. Closes: #580277. + + -- Shaun Jackman <[email protected]> Wed, 28 Apr 2010 11:55:31 -0700 -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/gmap.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
