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commit f1a530b5fdc87a9a65781a8098f079d063112816 Author: Alexandre Mestiashvili <[email protected]> Date: Thu May 7 15:27:05 2015 +0200 d/README.Debian: add note about subread user guide url d/doc-base: remove, as no documentation supplied with the package d/subread.docs: remove SubreadUserGuide.pdf d/subread.install: lineup the lines --- debian/README.Debian | 6 +++++- debian/doc-base | 12 ------------ debian/subread.docs | 1 - debian/subread.install | 26 +++++++++++++------------- 4 files changed, 18 insertions(+), 27 deletions(-) diff --git a/debian/README.Debian b/debian/README.Debian index a0a9438..b09a4f4 100644 --- a/debian/README.Debian +++ b/debian/README.Debian @@ -8,4 +8,8 @@ The man pages for subread tools are generated using help2man tool. Tests and annotations are provided by subread-data package. --- Alex Mestiashvili <[email protected]> Mon, 16 Mar 2015 16:18:09 +0100 +Subread User Guide can be found on the project's web site: + + http://bioinf.wehi.edu.au/subread-package/SubreadUsersGuide.pdf + +-- Alex Mestiashvili <[email protected]> Thu, 07 May 2015 15:24:57 +0200 diff --git a/debian/doc-base b/debian/doc-base deleted file mode 100644 index 24013ba..0000000 --- a/debian/doc-base +++ /dev/null @@ -1,12 +0,0 @@ -Document: subread -Title: Users Guide for subread aligner -Author: Liao Y, Smyth GK, Shi W -Abstract: The Subread/Rsubread packages comprise a suite of high-performance - software programs for processing next-generation sequencing data. Included in - these packages are Subread aligner, Subjunc aligner, Subindel long indel - detection program, featureCounts read quantification program, exactSNP SNP - calling program and other utility programs. -Section: Science/Biology - -Format: pdf -Files: /usr/share/doc/subread/SubreadUsersGuide.pdf diff --git a/debian/subread.docs b/debian/subread.docs index 05bd242..71dfd5b 100644 --- a/debian/subread.docs +++ b/debian/subread.docs @@ -1,2 +1 @@ README.txt -doc/SubreadUsersGuide.pdf diff --git a/debian/subread.install b/debian/subread.install index b4a7a27..603d9ab 100644 --- a/debian/subread.install +++ b/debian/subread.install @@ -1,13 +1,13 @@ -bin/exactSNP usr/bin -bin/featureCounts usr/bin -bin/subindel usr/bin -bin/subjunc usr/bin -bin/subread-align usr/bin -bin/subread-buildindex usr/bin -bin/utilities/coverageCount usr/lib/subread -bin/utilities/globalReassembly usr/lib/subread -bin/utilities/propmapped usr/lib/subread -bin/utilities/qualityScores usr/lib/subread -bin/utilities/removeDup usr/lib/subread -bin/utilities/subread-fullscan usr/lib/subread -bin/utilities/subtools usr/lib/subread +bin/exactSNP usr/bin +bin/featureCounts usr/bin +bin/subindel usr/bin +bin/subjunc usr/bin +bin/subread-align usr/bin +bin/subread-buildindex usr/bin +bin/utilities/coverageCount usr/lib/subread +bin/utilities/globalReassembly usr/lib/subread +bin/utilities/propmapped usr/lib/subread +bin/utilities/qualityScores usr/lib/subread +bin/utilities/removeDup usr/lib/subread +bin/utilities/subread-fullscan usr/lib/subread +bin/utilities/subtools usr/lib/subread -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/subread.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
