This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-screed.
commit 0004d7d89e70edac27fda76b4930556269265af3 Merge: 203880a 458072d Author: Michael R. Crusoe <[email protected]> Date: Wed May 27 21:27:51 2015 -0400 Merge tag 'upstream/0.8' Upstream version 0.8 .gitattributes | 1 + .gitignore | 12 + .travis.yml | 6 - CODE_OF_CONDUCT.rst | 35 + ChangeLog | 61 + Doxyfile.in | 2303 ++++++++++++++++++++++++++++++ MANIFEST.in | 4 + Makefile | 117 ++ README.md | 2 +- TODO | 2 + benchmarks/fqGen.py | 10 +- benchmarks/fqToFaConvert.py | 8 +- benchmarks/mysql/mysqlCreateTimeit.py | 2 +- benchmarks/pgres/pgresCreateTimeit.py | 2 +- benchmarks/screedCreateTimeit.py | 2 +- bigtests/__init__.py | 30 +- doc/CODE_OF_CONDUCT.txt | 1 + doc/COPYRIGHT.txt | 2 - doc/LICENSE.txt | 6 +- doc/_static/labibi.css | 54 + doc/_static/labibi.js | 29 + doc/conf.py | 33 +- doc/dev/CODE_OF_CONDUCT.rst | 1 + doc/dev/coding-guidelines-and-review.txt | 66 + doc/dev/index.txt | 20 + doc/dev/release-checklist.txt | 142 ++ doc/index.txt | 9 +- doc/{ => release-notes}/RELEASE-0.5.txt | 4 + doc/release-notes/RELEASE-0.8.md | 64 + doc/release-notes/index.txt | 11 + doc/schema.txt | 5 - doc/screed.html | 14 +- doc/screed.txt | 45 +- doc/user/known-issues.txt | 26 + get_version.py | 16 + jenkins-build.sh | 26 + screed/__init__.py | 68 +- screed/_version.py | 191 +++ screed/conversion.py | 28 +- screed/createscreed.py | 12 +- screed/dna.py | 7 +- screed/dump_to_fasta.py | 5 +- screed/dump_to_fastq.py | 5 +- screed/fadbm.py | 3 +- screed/fasta.py | 9 +- screed/fastq.py | 25 +- screed/fqdbm.py | 2 +- screed/hava.py | 2 +- screed/openscreed.py | 98 +- screed/pygr_api.py | 33 +- screed/screedRecord.py | 33 +- screed/seqparse.py | 8 +- screed/tests/havaGen.py | 17 +- screed/tests/test.fa.zip | Bin 0 -> 4237 bytes screed/tests/test.fastq.bz2 | Bin 0 -> 3730 bytes screed/tests/test_convert.py | 7 +- screed/tests/test_dictionary.py | 13 +- screed/tests/test_dna.py | 28 + screed/tests/test_fasta.py | 44 +- screed/tests/test_fasta_recover.py | 5 +- screed/tests/test_fastq.py | 35 +- screed/tests/test_fastq_recover.py | 2 + screed/tests/test_hava_methods.py | 35 +- screed/tests/test_nodb.py | 6 +- screed/tests/test_open.py | 26 +- screed/tests/test_pygr_api.py | 39 +- screed/tests/test_shell.py | 8 +- screed/tests/test_streaming.py | 85 ++ setup.py | 22 +- versioneer.py | 913 ++++++++++++ 70 files changed, 4685 insertions(+), 300 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-screed.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
