This is an automated email from the git hooks/post-receive script. plessy pushed a commit to branch debian/unstable in repository samtools.
commit a5f28a0f7a32c48ea7241913cec87fce0de35ab3 Merge: 6ce5671 255f97d Author: Charles Plessy <[email protected]> Date: Mon Jun 15 21:23:53 2015 +0900 Merge tag '1.2' into debian/unstable Bug fix release INSTALL | 2 +- Makefile | 11 +- NEWS | 16 ++ README | 23 ++ bam.h | 2 +- bam2bcf_indel.c | 40 ++-- bam2depth.c | 16 +- bam_mate.c | 3 +- bam_md.c | 1 - bam_plcmd.c | 45 +++- bam_sort.c | 61 +++-- bam_stat.c | 40 +++- bamtk.c | 6 +- errmod.c | 7 +- kaln.c | 486 --------------------------------------- kaln.h | 67 ------ misc/ace2sam.c | 2 +- misc/plot-bamstats | 2 +- misc/seq_cache_populate.pl | 5 + padding.c | 2 +- sam.c | 8 +- sam.h | 3 +- sam_view.c | 27 ++- samtools.1 | 36 +-- stats.c | 21 +- test/merge/test_rtrans_build.c | 4 +- test/merge/test_trans_tbl_init.c | 2 +- test/mpileup/expected/9.out | 20 +- test/mpileup/regression.sh | 125 +++++----- test/stat/1.stats.expected | 2 +- test/stat/2.stats.expected | 2 +- test/stat/3.stats.expected | 2 +- test/stat/4.stats.expected | 2 +- test/stat/5.stats.expected | 2 +- test/stat/6.stats.expected | 2 +- test/test.pl | 41 +++- 36 files changed, 374 insertions(+), 762 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/samtools.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
