This is an automated email from the git hooks/post-receive script.
malex-guest pushed a change to branch upstream
in repository subread.
from 91f65e5 Imported Upstream version 1.4.6-p4+dfsg
new ea3f671 Imported Upstream version 1.4.6-p5+dfsg
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
doc/MDSplot.png | Bin 0 -> 22947 bytes
doc/SubreadUsersGuide.bib | 73 ++
doc/SubreadUsersGuide.tex | 1219 +++++++++++++++++++++
doc/indel.png | Bin 0 -> 108132 bytes
doc/junction.png | Bin 0 -> 172344 bytes
doc/seed-and-vote.png | Bin 0 -> 112767 bytes
doc/voom_mean_variance.png | Bin 0 -> 99213 bytes
src/HelperFunctions.c | 47 +-
src/HelperFunctions.h | 2 +-
src/core-junction.c | 24 +-
src/coverage_calc.c | 18 +-
src/makefile.version | 2 +-
src/readSummary.c | 669 ++++++-----
src/subread.h | 1 +
test/featureCounts/result/test-minimum.FC | 9 +
test/featureCounts/result/test-minimum.FC.summary | 12 +
16 files changed, 1768 insertions(+), 308 deletions(-)
create mode 100644 doc/MDSplot.png
create mode 100644 doc/SubreadUsersGuide.bib
create mode 100644 doc/SubreadUsersGuide.tex
create mode 100644 doc/indel.png
create mode 100644 doc/junction.png
create mode 100644 doc/seed-and-vote.png
create mode 100644 doc/voom_mean_variance.png
create mode 100644 test/featureCounts/result/test-minimum.FC
create mode 100644 test/featureCounts/result/test-minimum.FC.summary
--
Alioth's /usr/local/bin/git-commit-notice on
/srv/git.debian.org/git/debian-med/subread.git
_______________________________________________
debian-med-commit mailing list
[email protected]
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
