This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository snakemake.
commit 5610104d161bdaeed7a0d78b2869ec2de506c46b Author: Kevin Murray <[email protected]> Date: Sun Sep 13 23:37:33 2015 +1000 Add initial debian packaging of snakemake --- debian/changelog | 5 +++++ debian/compat | 1 + debian/control | 24 ++++++++++++++++++++++++ debian/copyright | 34 ++++++++++++++++++++++++++++++++++ debian/rules | 15 +++++++++++++++ debian/source/format | 1 + debian/watch | 4 ++++ 7 files changed, 84 insertions(+) diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..e0f5a5e --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +snakemake (3.4-1) UNRELEASED; urgency=low + + * Initial release (Closes: #798824) + + -- Kevin Murray <[email protected]> Sun, 13 Sep 2015 22:58:41 +1000 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..81e00bb --- /dev/null +++ b/debian/control @@ -0,0 +1,24 @@ +Source: snakemake +Section: science +Priority: optional +Maintainer: Debian Med Packaging <[email protected]> +Uploaders: Kevin Murray <[email protected]> +Build-Depends: debhelper (>= 9), + dh-python, + python3 (>=3.2) +Standards-Version: 3.9.6 +Homepage: https://bitbucket.org/johanneskoester/snakemake +Vcs-Git: git://anonscm.debian.org/debian-med/snakemake.git +Vcs-Browser: https://anonscm.debian.org/gitweb/?p=debian-med/snakemake.git;a=summary + +Package: snakemake +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${python3:Depends} +Description: a pythonic workflow management system + Build systems like GNU Make are frequently used to create complicated + workflows, e.g. in bioinformatics. This project aims to reduce the + complexity of creating workflows by providing a clean and modern domain + specific language (DSL) in python style, together with a fast and + comfortable execution environment. diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..acf3ba8 --- /dev/null +++ b/debian/copyright @@ -0,0 +1,34 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: snakemake +Upstream-Contact: Johannes Köster <[email protected]> +Source: https://bitbucket.org/johanneskoester/snakemake + +Files-excluded: conda, + docker + +Files: * +Copyright: 2015 Johannes Köster <[email protected]> +License: Expat + +Files: debian/* +Copyright: 2015 Kevin Murray <[email protected]> +License: Expat + +License: Expat + Permission is hereby granted, free of charge, to any person obtaining a copy + of this software and associated documentation files (the "Software"), to deal + in the Software without restriction, including without limitation the rights + to use, copy, modify, merge, publish, distribute, sublicense, and/or sell + copies of the Software, and to permit persons to whom the Software is + furnished to do so, subject to the following conditions: + . + The above copyright notice and this permission notice shall be included in all + copies or substantial portions of the Software. + . + THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR + IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, + FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE + AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER + LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, + OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE + SOFTWARE. diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..fa18f99 --- /dev/null +++ b/debian/rules @@ -0,0 +1,15 @@ +#!/usr/bin/make -f +# See debhelper(7) (uncomment to enable) +# output every command that modifies files on the build system. +#export DH_VERBOSE = 1 + +export PYBUILD_NAME=snakemake +export PYBUILD_DESTDIR_python3=debian/snakemake + +# main packaging script based on dh7 syntax +%: + dh $@ --with python3 --buildsystem=pybuild --parallel + +get-orig-source: + uscan --verbose --force-download --repack --compression xz + diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..f16e098 --- /dev/null +++ b/debian/watch @@ -0,0 +1,4 @@ +# Compulsory line, this is a version 3 file +version=3 + +https://bitbucket.org/johanneskoester/snakemake/downloads#tag-downloads .*/v(\d\S*)\.tar\.gz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/snakemake.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
