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commit d4b38ce02d34367a9ac0d215f76f41d95b8bd3c9 Author: Alexandre Gramfort <[email protected]> Date: Tue Oct 4 20:51:44 2011 -0400 FIX : bug fix with stc.times in apply_inverse_raw --- mne/minimum_norm/inverse.py | 2 +- mne/minimum_norm/tests/test_inverse.py | 8 ++++++-- 2 files changed, 7 insertions(+), 3 deletions(-) diff --git a/mne/minimum_norm/inverse.py b/mne/minimum_norm/inverse.py index 787155a..1898a2e 100644 --- a/mne/minimum_norm/inverse.py +++ b/mne/minimum_norm/inverse.py @@ -617,7 +617,7 @@ def apply_inverse_raw(raw, inverse_operator, lambda2, dSPM=True, if noise_norm is not None: sol *= noise_norm - tmin = float(times[0]) / raw.info['sfreq'] + tmin = float(times[0]) tstep = 1.0 / raw.info['sfreq'] stc = _make_stc(sol, tmin, tstep, lh_vertno, rh_vertno) print '[done]' diff --git a/mne/minimum_norm/tests/test_inverse.py b/mne/minimum_norm/tests/test_inverse.py index c5545a2..8f29bac 100644 --- a/mne/minimum_norm/tests/test_inverse.py +++ b/mne/minimum_norm/tests/test_inverse.py @@ -38,6 +38,7 @@ snr = 3.0 lambda2 = 1.0 / snr ** 2 dSPM = True + def test_inverse_operator(): """Test MNE inverse computation @@ -65,10 +66,14 @@ def test_inverse_operator(): def test_apply_mne_inverse_raw(): """Test MNE with precomputed inverse operator on Raw """ + start = 3 + stop = 10 + _, times = raw[0, start:stop] stc = apply_inverse_raw(raw, inverse_operator, lambda2, dSPM=True, - label=label, start=0, stop=10, nave=1, + label=label, start=start, stop=stop, nave=1, pick_normal=False) assert_true(np.all(stc.data > 0)) + assert_array_almost_equal(stc.times, times) def test_apply_mne_inverse_epochs(): @@ -90,4 +95,3 @@ def test_apply_mne_inverse_epochs(): assert_true(len(stcs) == 1) assert_true(np.all(stcs[0].data > 0)) assert_true(np.all(stcs[0].data < 42)) - -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-mne.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
