This is an automated email from the git hooks/post-receive script. afif-guest pushed a commit to branch master in repository blasr.
commit 74cd6870abcc537b7d85e59b065bea4008ed2b8b Merge: 7181937 b282ecd Author: Afif Elghraoui <[email protected]> Date: Sun Dec 13 12:41:39 2015 -0800 Merge tag 'upstream/0_20151014+git8e668be' Upstream version 0~20151014+git8e668be Blasr.cpp | 4351 ++++---------------- MappingSemaphores.h | 45 - README.INSTALL.md | 18 +- configure.py | 21 +- ctest/affineAlign.t | 2 +- include/BlasrAlign.hpp | 122 + include/BlasrAlignImpl.hpp | 1564 +++++++ include/BlasrHeaders.h | 149 + include/BlasrMiscs.hpp | 100 + include/BlasrMiscsImpl.hpp | 223 + include/BlasrUtils.hpp | 199 + include/BlasrUtilsImpl.hpp | 1225 ++++++ include/MappingBuffers.hpp | 116 + MappingIPC.h => include/MappingIPC.h | 4 +- MappingParameters.h => include/MappingParameters.h | 40 +- include/MappingSemaphores.h | 45 + include/ReadAlignments.hpp | 199 + .../RegisterBlasrOptions.h | 62 +- .../RegisterFilterOptions.h | 30 +- makefile | 2 + rules.mk | 3 + utils/PulseToFasta.cpp | 106 +- utils/SamFilter.cpp | 2 +- utils/ToAfg.cpp | 15 +- 24 files changed, 4794 insertions(+), 3849 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/blasr.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
