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bob.dybian-guest pushed a change to branch master
in repository plink1.9.
from a698c34 Upload to unstable
new 597ab21 Imported Upstream version 1.90~b3.28-151216
new ae7a77c Merge tag 'upstream/1.90_b3.28-151216'
new 4cba1ae Update d/changelog
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile | 2 +-
debian/changelog | 6 +
plink.c | 1020 ++++++++++++++++++---------------
plink_assoc.c | 742 +++---------------------
plink_assoc.h | 10 -
plink_calc.c | 33 +-
plink_cluster.c | 15 +-
plink_cluster.h | 2 +-
plink_common.c | 175 +++---
plink_common.h | 90 +--
plink_data.c | 1654 +++++++++++++++++++++++++++++++++---------------------
plink_data.h | 8 +-
plink_dosage.c | 90 +--
plink_dosage.h | 7 +-
plink_family.c | 1270 ++++++++++++++++++++++++++++++++++++++---
plink_family.h | 2 +-
plink_filter.c | 237 ++++----
plink_filter.h | 24 +-
plink_glm.c | 111 ++--
plink_help.c | 39 +-
plink_lasso.c | 1 +
plink_ld.c | 104 ++--
plink_misc.c | 244 +++++---
plink_misc.h | 1 +
plink_perm.c | 333 +++++++++++
plink_perm.h | 196 +++++++
plink_set.c | 85 ++-
plink_set.h | 4 +-
28 files changed, 4192 insertions(+), 2313 deletions(-)
create mode 100644 plink_perm.c
create mode 100644 plink_perm.h
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