This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository debian-med-benchmarking-spec.git.
commit 88ff8e6a1aaa8a394a305e103c4f0a3ce46d12cd Author: Kevin Murray <[email protected]> Date: Fri Feb 5 15:51:48 2016 +0100 Post-mrc review --- benchmarking.md | 21 ++++++++++++++++++++- 1 file changed, 20 insertions(+), 1 deletion(-) diff --git a/benchmarking.md b/benchmarking.md index 94a3677..28f8f1b 100644 --- a/benchmarking.md +++ b/benchmarking.md @@ -5,8 +5,27 @@ Brainstorm of Debian Med/SEQwiki/biotools benchmarking service **This thing needs a name, ASAP!** +Authors +------- + +- Piotr Wojtek Dabrowski +- Kevin Murray +- Your name here (please) + +Overview +-------- + +tl;dr: A jenkins.d.n/debci service similar to ReproducibleBuilds project, but +for tool's scientific accuracy. + + - Curate simulated & published datasets + - Select tools with CWL tool descriptions and EDAM metadata + - Run CWL workflows in containers when package, data, benchmark or + dependencies change + - Inspect results of tool execution with benchmarking metrics + - Report metrics to Debian infrastructure (UDD) and wider community (SEQWiki, + bio.tools) -Similar to ReproducibleBuilds project, but for scientific accuracy Architecture: ------------- -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/debian-med-benchmarking-spec.git.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
