This is an automated email from the git hooks/post-receive script. sascha-guest pushed a commit to branch master in repository tantan.
commit 8be446275383fdc5fbe27eb273f05084eb8b7a6a Merge: bb07b96 2fac365 Author: Sascha Steinbiss <[email protected]> Date: Thu Feb 11 09:45:34 2016 +0000 Merge tag 'upstream/13' Upstream version 13 COPYING.txt | 674 ++++++++++++++++++ ChangeLog.txt | 84 +++ Makefile | 25 + README.html | 523 ++++++++++++++ README.txt | 187 +++++ debian/changelog | 7 - debian/compat | 1 - debian/control | 20 - debian/copyright | 31 - debian/createmanpages | 16 - debian/lintian-overrides | 1 - debian/manpages | 1 - debian/rules | 16 - debian/source/format | 1 - debian/tantan.1 | 58 -- debian/upstream/edam | 13 - debian/upstream/metadata | 11 - debian/watch | 2 - src/CA_code/lambda_calculator.c | 465 ++++++++++++ src/CA_code/lambda_calculator.h | 10 + src/CA_code/lubksb.c | 24 + src/CA_code/ludcmp.c | 61 ++ src/CA_code/nrutil.c | 239 +++++++ src/CA_code/nrutil.h | 19 + src/Makefile | 27 + src/mcf_alphabet.cc | 82 +++ src/mcf_alphabet.hh | 52 ++ src/mcf_fasta_sequence.cc | 113 +++ src/mcf_fasta_sequence.hh | 29 + src/mcf_score_matrix.cc | 167 +++++ src/mcf_score_matrix.hh | 60 ++ src/mcf_score_matrix_probs.cc | 45 ++ src/mcf_score_matrix_probs.hh | 55 ++ src/mcf_tantan_options.cc | 165 +++++ src/mcf_tantan_options.hh | 31 + src/mcf_util.cc | 23 + src/mcf_util.hh | 46 ++ src/tantan.cc | 462 ++++++++++++ src/tantan.hh | 120 ++++ src/tantan_app.cc | 293 ++++++++ src/version.hh | 1 + test/atMask.mat | 14 + test/hg19_chrM.fa | 333 +++++++++ test/panda.fastq | 400 +++++++++++ test/tantan_test.out | 1489 +++++++++++++++++++++++++++++++++++++++ test/tantan_test.sh | 31 + test/titin_human.fa | 688 ++++++++++++++++++ 47 files changed, 7037 insertions(+), 178 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/tantan.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
