This is an automated email from the git hooks/post-receive script. bob.dybian-guest pushed a commit to branch master in repository beagle.
commit 82d376410b97a561cccdee506f507ef5c35ae32c Author: Dylan Aïssi <[email protected]> Date: Sat Jun 25 00:35:51 2016 +0200 Refresh patch --- debian/patches/01_Update_htsjtk.patch | 27 ++++++++------------------- 1 file changed, 8 insertions(+), 19 deletions(-) diff --git a/debian/patches/01_Update_htsjtk.patch b/debian/patches/01_Update_htsjtk.patch index 8c0b98d..b9e1bb4 100644 --- a/debian/patches/01_Update_htsjtk.patch +++ b/debian/patches/01_Update_htsjtk.patch @@ -6,22 +6,11 @@ Forwarded: No --- a/blbutil/InputIt.java +++ b/blbutil/InputIt.java @@ -28,7 +28,7 @@ - import java.io.InputStreamReader; - import java.util.NoSuchElementException; - import java.util.zip.GZIPInputStream; --import net.sf.samtools.util.BlockCompressedInputStream; -+import htsjdk.samtools.util.BlockCompressedInputStream; - - /** - * <p>Class {@code InputIt} is a buffered iterator whose {@code next()} ---- a/blbutil/FileUtil.java -+++ b/blbutil/FileUtil.java -@@ -32,7 +32,7 @@ - import java.io.OutputStream; - import java.io.PrintWriter; - import java.util.zip.GZIPOutputStream; --import net.sf.samtools.util.BlockCompressedOutputStream; -+import htsjdk.samtools.util.BlockCompressedOutputStream; - - /** - * Class {@code FileUtil} contains static methods for working with files. + import java.io.InputStreamReader; + import java.util.NoSuchElementException; + import java.util.zip.GZIPInputStream; +-import net.sf.samtools.util.BlockCompressedInputStream; ++import htsjdk.samtools.util.BlockCompressedInputStream; + + /** + * <p>Class {@code InputIt} is a buffered iterator whose {@code next()} -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/beagle.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
