This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch master in repository mash.
commit 7798a893007abebcd01c02e93627319c75caddd5 Author: Sascha Steinbiss <[email protected]> Date: Tue Jul 19 20:28:40 2016 +0000 add autopkgtest --- debian/control | 1 + debian/tests/control | 3 +++ debian/tests/genomes.tar.xz | Bin 0 -> 2144700 bytes debian/tests/run-example | 20 ++++++++++++++++++++ 4 files changed, 24 insertions(+) diff --git a/debian/control b/debian/control index 75530a2..e0c0eff 100644 --- a/debian/control +++ b/debian/control @@ -13,6 +13,7 @@ Build-Depends: debhelper (>= 9), libjs-mathjax, asciidoctor Standards-Version: 3.9.8 +Testsuite: autopkgtest Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/mash.git Vcs-Git: https://anonscm.debian.org/git/debian-med/mash.git Homepage: https://mash.readthedocs.io diff --git a/debian/tests/control b/debian/tests/control new file mode 100644 index 0000000..e4a4ee9 --- /dev/null +++ b/debian/tests/control @@ -0,0 +1,3 @@ +Tests: run-example +Depends: mash +Restrictions: allow-stderr diff --git a/debian/tests/genomes.tar.xz b/debian/tests/genomes.tar.xz new file mode 100644 index 0000000..3fc64c4 Binary files /dev/null and b/debian/tests/genomes.tar.xz differ diff --git a/debian/tests/run-example b/debian/tests/run-example new file mode 100755 index 0000000..2353ae0 --- /dev/null +++ b/debian/tests/run-example @@ -0,0 +1,20 @@ +#!/bin/sh +# autopkgtest check: Run test alignment with command line tool +# Author: Sascha Steinbiss <[email protected]> +set -e + +TESTDIR=$(pwd)/debian/tests +WORKDIR=$(mktemp -d) +trap "rm -rf $WORKDIR" 0 INT QUIT ABRT PIPE TERM +cd $WORKDIR + +tar xJvf $TESTDIR/genomes.tar.xz +mash dist genome1.fna genome2.fna + +mash sketch genome1.fna +mash sketch genome2.fna +mash dist genome1.fna.msh genome2.fna.msh + +mash sketch -o reference genome1.fna genome2.fna +mash info reference.msh +mash dist reference.msh genome3.fna -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/mash.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
